AMCG00006873 (LOC108429457,LOC107745572,LOC107549582,LOC105913374,LOC107669036)


Basic Information

Item Value
gene id AMCG00006873
gene name LOC108429457,LOC107745572,LOC107549582,LOC105913374,LOC107669036
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 23631039 ~ 23752269 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006873
ATGAGGCGAGttgagTCACCATTTCATCGCACGATATGGGTGGAGATAGATTATTATATTGTCCTTGGAAGTTTACAAAGCAGGTTGACAGAAGCACATCGCGCCGCAGTCAAAGTCATCCGAAGAATGCAGTATTTTGTTGCCAGGCGGAAATTTCAGCAAGCCAGGAAGCCATATGATGTACGAGACGTGATTGAGCAATACTCTCAGGGACACCTCAACATGATGGTACGGATAAAAGAACTGCAAAGAAGATTGGACCACTCTTTGGGGAAACCAGGGATGTTTCTTTCAGAAAAGGGCCTAGATAAAGGATACTACACAGTTGGAGCCAGACTGATCCGTTTAGAGGATAAGGTCACACAGATGGACCAGAAAGTAGAGGACATCTTAAAGATCTTGGTGGACCAGTTTAAACCACAGCCAGAGCTTCTGCAGAAGGCAGCACCAaATTTGTGTCCAGACGCTCAGGGgcCGAGATCATCACCTTTGTTGTCTAACCACATTGCTGGCTCTGGCTATGGGAGAACGTTTCTTCTCATGGACATCCCTCCTGATGAAAACAGGATCGTTATGAGTGTCCACCGCTGTTTAGGGATACAGAATAAACAGATATCCAAGCGTGTCTATTAA

Function

NR:

description
PREDICTED: potassium voltage-gated channel subfamily KQT member 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006873 True 633 mRNA 0.46 11 23631039 23752269

Neighbor

gene id symbol gene type direction distance location
AMCG00006864 NA coding downstream 254234 23375367 ~ 23376805 (-)
AMCG00006862 si:ch211-125a15.1,LOC107743608,LOC107726025,LOC107580661,LOC107592225,LOC107658829 coding downstream 328865 23287256 ~ 23302174 (-)
AMCG00006855 NA coding downstream 702634 22881514 ~ 22928405 (-)
AMCG00006847 NA coding downstream 979522 22626401 ~ 22651517 (-)
AMCG00006846 NA coding downstream 1023656 22592099 ~ 22607383 (-)
AMCG00006876 LOC108429384,LOC108274557,LOC106584451 coding upstream 97376 23849645 ~ 23868247 (-)
AMCG00006877 NA coding upstream 146890 23899159 ~ 23899569 (-)
AMCG00006875 NA coding upstream 168305 23920574 ~ 23925526 (-)
AMCG00006880 tead4,LOC105029403,LOC107549581,LOC107669037 coding upstream 180131 23932400 ~ 23970204 (-)
AMCG00006881 NA coding upstream 219847 23972116 ~ 23994354 (-)
G113066 hipk2 non-coding downstream 76300 23547797 ~ 23554739 (-)
G113014 NA non-coding downstream 307888 23322933 ~ 23323151 (-)
G113013 NA non-coding downstream 309268 23321077 ~ 23321771 (-)
G112979 NA non-coding downstream 476136 23153868 ~ 23154903 (-)
G112953 NA non-coding downstream 689369 22941459 ~ 22941670 (-)
G113209 NA non-coding upstream 563463 24315732 ~ 24321862 (-)
G113212 NA non-coding upstream 578818 24331087 ~ 24335914 (-)
G113225 NA non-coding upstream 621423 24373692 ~ 24375929 (-)
G113301 NA non-coding upstream 919519 24671788 ~ 24673498 (-)
G113374 NA non-coding upstream 1639527 25391796 ~ 25392318 (-)
AMCG00006866 NA other downstream 59906 23568155 ~ 23571133 (-)
G113050 NA other downstream 223832 23404175 ~ 23407207 (-)
AMCG00006854 NA other downstream 672733 22953176 ~ 22958306 (-)
AMCG00006841 NA other downstream 1433375 22130495 ~ 22197664 (-)
AMCG00006813 NA other downstream 2666477 20854057 ~ 20964562 (-)
G113530 NA other upstream 2747746 26500015 ~ 26500681 (-)
G113645 ptn,LOC106609498 other upstream 3650331 27402600 ~ 27527348 (-)
G113775 LOC100846954 other upstream 4514993 28267262 ~ 28292598 (-)
G113833 NA other upstream 4958950 28711219 ~ 28812548 (-)

Expression


Co-expression Network