AMCG00006882


Basic Information

Item Value
gene id AMCG00006882
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 24025708 ~ 24031202 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006882
ATGCCTGTCAGTTTCAGGCTATTTGTGAACCCAACCACGATGTTGACCCACACCCTCATCCCGCAATGCATTGCCCACAAGAACCTCTTTGGAGCCATTTGTGAAGTTACCATCACATTTGTGATCGACACCTCAGGCAGCATGTATCTCAAACTGGGCAAAGTGAAGGACCATCTCATTGAAGCGCTCTTCCACAGGGCACAGACGGTACCACACTTCACCTTCAACCTGGTGGAGTTCAACAGCGAGGTGAGGAGGTGGTGCGAGCGCTCGGTCCAGTCCAGTCTGCTCTCTCTGTCAGACGCAGTGTCCTGGATCCGAGGACTGGAGTGCCACTCGGTCTCGGACACCGGGGCCCTTCTAACTGCCCTGAAATGTGCTCTGAGTGACCCTGGGTGCCAGGTTGTGTGCCTGATCACAGACGGGCTTCTACAGAGCCCTGCAGAGGAAGTGCGGCCCTGTGTGGCACTGTGGCCCCCAATCCATGTGGTGTACCTCAGCGAGGAGAGGGGTCAGCACTCCCCGCAATGGCTGCTGCAGGAAATGGCAAGGGAGACTGGAGGCACTTTCACGGTGTCGGGAGCACTGGAACCTGTTTGCAGTAGGCACAGGCCCGTTCCCTGGGCAGGAGGTACAGACTGCTGTTCAGGATGTCACAGAACACAGAGCATCTGTCCACATGTCCGGTTCTGTAAGTCACCCGTGGACTCGGCACTGGAAGGCAGTTTTGTTGATGGAGCCCATGGAGGTCCTATGCTTGTCAGAGGAGCACGAGTCCTGGCCAGAAGACACCAAGATAGGCTGTACTACCCCGGACACCTCTGCCAGGAAGCCGTAGGTTTAGGCAGGAGGTTCACGGTGGAGTTCGACAGAGGGAAGTGTTTCCGGGGAGGGGCAGGAAGTCGTATACAGGAGACTGCCCTCTGTGACCTGCTGCACTTTGAAGATGCCTGGCGGTTCCCTGTCTGCCCAGGAGACTCAGTCCTGGCTCCCTGGGAAAGTGGAGCAAGCCAGTATGGGCCAGGGACTGTCCTACTGGGGCAGGAGAACAGGAGCAACACACAAGAGGTGTGCAGCAGCGATCAGGGTTTGGTGGTGACTTTTTGGAACGGACGCACTGAGAAAGTGCCACCTGGGCAGGCGGTGAGAATCCCCCGCCAGCTCTATGAGTTCCTGGTGCTGGAGCTCCAAATGCCAGCCACCGCCAGGGAGAGTCTCCAGCAGTCTGTCCAGCATTTTCCCATGATGGCACCTCCTGGGTACAGGGCCTGGGGATCACTGGCTGCCTGGAGCTGCCTGGCCCCAGCCTGCTCAGATGCCCACAGCTACTTCACAGCTGACATCGCCTCTACGCCTATAAGCTCACAAGGCAGCCGTGGACAGACACCAACAGTGCAGAGGGCCCAAGCCCAGGGAGTtttgagagagaaggagagatcACTTACTAGAGCCCGCTCTTTGCCAGTGAAGAACAGCAGGACTGGTGTGGTGGGGACCCAGAAAGagaagtgtgagagagagatctgcAGAGAGACAAGACAGCAAGAAAAAGCAAAGTGGTGGACAACACAACAGGACAGTGGTTTTGATGTGCTCTGTTAG

Function

GO:

id name namespace
GO:0005657 replication fork cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006882 True 1602 mRNA 0.57 7 24025708 24031202

Neighbor

gene id symbol gene type direction distance location
AMCG00006881 NA coding downstream 31354 23972116 ~ 23994354 (-)
AMCG00006880 tead4,LOC105029403,LOC107549581,LOC107669037 coding downstream 55504 23932400 ~ 23970204 (-)
AMCG00006875 NA coding downstream 100182 23920574 ~ 23925526 (-)
AMCG00006877 NA coding downstream 126139 23899159 ~ 23899569 (-)
AMCG00006876 LOC108429384,LOC108274557,LOC106584451 coding downstream 157461 23849645 ~ 23868247 (-)
AMCG00006883 NA coding upstream 9875 24041077 ~ 24057825 (-)
AMCG00006887 NA coding upstream 322235 24353437 ~ 24357780 (-)
AMCG00006886 fgf6,LOC106573196,LOC105018229,LOC106609473 coding upstream 327979 24359181 ~ 24367936 (-)
AMCG00006889 LOC107707394 coding upstream 346597 24377799 ~ 24388627 (-)
AMCG00006891 NA coding upstream 357428 24388630 ~ 24407218 (-)
G113066 hipk2 non-coding downstream 470969 23547797 ~ 23554739 (-)
G113014 NA non-coding downstream 702557 23322933 ~ 23323151 (-)
G113013 NA non-coding downstream 703937 23321077 ~ 23321771 (-)
G112979 NA non-coding downstream 870805 23153868 ~ 23154903 (-)
G112953 NA non-coding downstream 1084038 22941459 ~ 22941670 (-)
G113209 NA non-coding upstream 284530 24315732 ~ 24321862 (-)
G113212 NA non-coding upstream 299885 24331087 ~ 24335914 (-)
G113225 NA non-coding upstream 342490 24373692 ~ 24375929 (-)
G113301 NA non-coding upstream 640586 24671788 ~ 24673498 (-)
G113374 NA non-coding upstream 1360594 25391796 ~ 25392318 (-)
AMCG00006866 NA other downstream 454575 23568155 ~ 23571133 (-)
G113050 NA other downstream 618501 23404175 ~ 23407207 (-)
AMCG00006854 NA other downstream 1067402 22953176 ~ 22958306 (-)
AMCG00006841 NA other downstream 1828044 22130495 ~ 22197664 (-)
AMCG00006813 NA other downstream 3061146 20854057 ~ 20964562 (-)
G113530 NA other upstream 2468813 26500015 ~ 26500681 (-)
G113645 ptn,LOC106609498 other upstream 3371398 27402600 ~ 27527348 (-)
G113775 LOC100846954 other upstream 4236060 28267262 ~ 28292598 (-)
G113833 NA other upstream 4680017 28711219 ~ 28812548 (-)

Expression


Co-expression Network