Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00006900 |
| gene name | LOC106609805 |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 24962174 ~ 24969473 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: voltage-dependent L-type calcium channel subunit alpha-1C-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00006900 | True | 528 | mRNA | 0.58 | 4 | 24962174 | 24969473 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00006897 | LOC107590584,LOC107732972 | coding | downstream | 156282 | 24784598 ~ 24805892 (-) |
| AMCG00006896 | cacna1c,LOC106515158,LOC101471946 | coding | downstream | 206353 | 24726492 ~ 24755821 (-) |
| AMCG00006895 | LOC107732972 | coding | downstream | 246885 | 24684008 ~ 24715289 (-) |
| AMCG00006890 | NA | coding | downstream | 522676 | 24421102 ~ 24439498 (-) |
| AMCG00006891 | NA | coding | downstream | 554956 | 24388630 ~ 24407218 (-) |
| AMCG00006902 | NA | coding | upstream | 162339 | 25131812 ~ 25145341 (-) |
| AMCG00006904 | adipor2,LOC107726009,LOC105910465 | coding | upstream | 273081 | 25242554 ~ 25258567 (-) |
| AMCG00006906 | LOC107656325,LOC106609811,LOC107658849,LOC107572035,LOC107726030 | coding | upstream | 340152 | 25309625 ~ 25313441 (-) |
| AMCG00006907 | LOC108442871 | coding | upstream | 431237 | 25400710 ~ 25448412 (-) |
| AMCG00006908 | NA | coding | upstream | 547102 | 25516575 ~ 25518323 (-) |
| G113301 | NA | non-coding | downstream | 288676 | 24671788 ~ 24673498 (-) |
| G113225 | NA | non-coding | downstream | 586245 | 24373692 ~ 24375929 (-) |
| G113212 | NA | non-coding | downstream | 626260 | 24331087 ~ 24335914 (-) |
| G113209 | NA | non-coding | downstream | 640312 | 24315732 ~ 24321862 (-) |
| G113066 | hipk2 | non-coding | downstream | 1407435 | 23547797 ~ 23554739 (-) |
| G113374 | NA | non-coding | upstream | 422323 | 25391796 ~ 25392318 (-) |
| G113375 | NA | non-coding | upstream | 426063 | 25395536 ~ 25398698 (-) |
| G113389 | NA | non-coding | upstream | 747052 | 25716525 ~ 25716987 (-) |
| G113390 | NA | non-coding | upstream | 748944 | 25718417 ~ 25718792 (-) |
| G113391 | NA | non-coding | upstream | 749889 | 25719362 ~ 25719575 (-) |
| AMCG00006866 | NA | other | downstream | 1391041 | 23568155 ~ 23571133 (-) |
| G113050 | NA | other | downstream | 1554967 | 23404175 ~ 23407207 (-) |
| AMCG00006854 | NA | other | downstream | 2003868 | 22953176 ~ 22958306 (-) |
| AMCG00006841 | NA | other | downstream | 2764510 | 22130495 ~ 22197664 (-) |
| AMCG00006813 | NA | other | downstream | 3997612 | 20854057 ~ 20964562 (-) |
| G113530 | NA | other | upstream | 1530542 | 26500015 ~ 26500681 (-) |
| G113645 | ptn,LOC106609498 | other | upstream | 2433127 | 27402600 ~ 27527348 (-) |
| G113775 | LOC100846954 | other | upstream | 3297789 | 28267262 ~ 28292598 (-) |
| G113833 | NA | other | upstream | 3741746 | 28711219 ~ 28812548 (-) |
