AMCG00006905 (fbxl14b,LOC106590767,LOC107580311,LOC107656333)


Basic Information

Item Value
gene id AMCG00006905
gene name fbxl14b,LOC106590767,LOC107580311,LOC107656333
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 25336345 ~ 25340058 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006905
CCTCGGCTTGGCAATGCGTGCGAGCTGAGCGCAAATGCAAAGCGAAACCTCGCTGCTTCACGACTGCGGGAGGAAGCGCCGCTCCGACCGGCCTGGGCTTTTTCTTCTCTATATTACTGGGCTTGTGGAGgtctttttgaaaatgtacgaCCGTTTGGATCCCCGGGGAGAACTAGAAGGGTTATCGCAAGACAAAGTGGGTAGTGCTGTCTGATCGCCGTGCGTTTCCCCCCCCTTTGCCGAGGGGTTGCACTGGAAGTGGCTTTTTTGGCTTTTTCATTTGAATCCTACTGCGCAACCCAGACGGATCACGTGGGACGTGGAGTTGATCGATTTGCACAAATATACATGAAAAGAGAAGCGAGAGAGGTAACTAGAAAGGGACGTTCGCCTGGATTATAAAAGATTGAGACTTCAAAGAAAACGTAGGGTTGGGTTAACCGAAATATATCTTTTTTATGCATGTGTAAAATGGAGACGCACATTTCGTGCCTCTTCCCGGAAATTTTAGCCATGATTTTCAGCTACTTGGATGTAAGGGACAAAGGCAGGGTTGCCCAAGTCTGTACGGCTTGGAGGGACGCTTCTTACCACAAGTCGGTGTGGAGGGGGGTGGAAGCCAAGTTGCATTTGAGGAGGGCCAACCCTTCCCTCTTCCCCAGTCTGCAGGCCAGAGGGATCAGAAGAGTGCAGATCCTCAGCCTGCGGCGCAGCCTGAGCTACGTGATCCAGGGGATGCCAAATATCGAGAGCCTCAACCTCAGCGGCTGCTACAACTTAACAGATAACGGCCTTGGACACGCTTTTGTACAGGAGATCCCGTCCCTGCGGGTCCTCAACCTGAGCCTCTGTAAGCAAATCACGGACTCCAGCCTGGGCAGGATCGCCCAGTATCTCAAGAACCTGGAGGTGTTGGAACTGGGCGGCTGCAGCAATATCACCAACACCGGCTTGCTACTCATCGCCTGGGGTTTGCACAGACTCAAGAGCCTCAACCTCCGCAGCTGCAGGCATGTCTCGGACGTGGGCATCGGCCACTTGGCTGGCATGACCCGGAGCGCGGCGGAGGGCTGCCTCAATCTGGAGTACCTGACCCTGCAAGACTGTCAGAAGTTGACGGACCTGTCCCTCAAGCACATCTCCAAAGGCCTGGCCAAACTCAAAGTGCTCAACCTGAGCTTCTGCGGGGGGATCTCGGATGCGGGCATGATCCATCTGTCCCACATGACCAGCCTCTGGAGCCTTAACCTGAGGTCGTGTGATAACATCAGTGACACTGGGATCATGCATCTGGCCATGGGCTCTCTGAGGCTCTCGGGACTGGACGTGTCCTTCTGCGACAAGATCGGCGACCAAAGCCTGGCATACATCGCCCAAGGTCTGTACCAGCTCAAGTCGCTGTCCCTGTGTTCGTGCCACATCAGTGACGATGGCATCAATAGGATGGTGCGGCAGATGCATGAGCTGAGGACCCTCAACATCGGCCAGTGCGTGCGGATTACAGACAAAGGACTGGAGCTCATTGCAGACCACTTGACTCAGCTCACGGGAATAGACCTCTATGGATGTACAAAAATCACGAAAAGGGGGCTGGAGAGGATCACGCAGCTCCCTTGCCTTAAAGTTTTAAACCTGGGACTGTGGCAGATGACCGAGAGCGAGAAAGTGAGGGCATTGAGCTGCTCCGCGCCGGGAGAGGAGGCGCCGATGGAGGCGGGGGTTTCCTTCACTGCTGAAGAACATAGCCGGCTTCTGCCTCCTGCACTTTCGGGGGAAATGTTTAGATGG

Function

symbol description
fbxl14b Predicted to enable ubiquitin-protein transferase activity. Predicted to be involved in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process. Predicted to act upstream of or within protein ubiquitination. Part of SCF ubiquitin ligase complex. Is expressed in hindbrain and midbrain. Orthologous to human FBXL14 (F-box and leucine rich repeat protein 14).

NR:

description
F-box and leucine-rich repeat protein 14b

GO:

id name namespace
GO:0016567 protein ubiquitination biological_process
GO:0019005 SCF ubiquitin ligase complex cellular_component
GO:0004842 ubiquitin-protein transferase activity molecular_function

KEGG:

id description
K10280 FBXL14; F-box and leucine-rich repeat protein 14

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006905 True 1788 mRNA 0.55 2 25336345 25340058

Neighbor

gene id symbol gene type direction distance location
AMCG00006903 NA coding upstream 121985 25156086 ~ 25214360 (+)
AMCG00006901 NA coding upstream 222006 25078387 ~ 25114339 (+)
AMCG00006899 NA coding upstream 294387 25040592 ~ 25041958 (+)
AMCG00006898 NA coding upstream 299872 25021130 ~ 25036473 (+)
AMCG00006894 NA coding upstream 682475 24650660 ~ 24653870 (+)
AMCG00006910 NA coding downstream 375769 25715827 ~ 25721613 (+)
AMCG00006916 NA coding downstream 470505 25810563 ~ 25822470 (+)
AMCG00006912 NA coding downstream 489416 25829474 ~ 25836610 (+)
AMCG00006911 NA coding downstream 511347 25851405 ~ 25861865 (+)
AMCG00006917 LOC107596953 coding downstream 572297 25912355 ~ 25937570 (+)
G113319 NA non-coding upstream 75943 25242565 ~ 25260402 (+)
G113283 NA non-coding upstream 659769 24673625 ~ 24676576 (+)
G113233 NA non-coding upstream 926041 24410057 ~ 24410304 (+)
G113224 NA non-coding upstream 963510 24370718 ~ 24372835 (+)
G113159 NA non-coding upstream 1047428 24076753 ~ 24288917 (+)
G113357 NA non-coding downstream 51797 25391855 ~ 25395392 (+)
G113358 NA non-coding downstream 80600 25420658 ~ 25420875 (+)
G113372 NA non-coding downstream 348677 25688735 ~ 25689111 (+)
G113373 NA non-coding downstream 357139 25697197 ~ 25697408 (+)
G113383 NA non-coding downstream 382823 25722881 ~ 25724671 (+)
AMCG00006893 ndufa9,LOC107572617,LOC107686627,LOC107732787 other upstream 749226 24509003 ~ 24587119 (+)
AMCG00006884 ccnd2a,ccnd2,LOC106573197,LOC106561356,LOC107575166,LOC107686624,LOC107732799 other upstream 1000429 24304696 ~ 24335916 (+)
AMCG00006878 ndufb2,LOC102790702 other upstream 1300233 24032089 ~ 24036112 (+)
AMCG00006865 hipk2 other upstream 1781604 23509149 ~ 23554741 (+)
AMCG00006829 NA other upstream 3713837 21617632 ~ 21622508 (+)
G113369 LOC108442871 other downstream 278009 25618067 ~ 25618445 (+)
G113400 NA other downstream 474997 25815055 ~ 25832942 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_028519 fbxl14b coding NC_007115.7 CM002888.2 8609517 ~ 8611841 (-)
grasscarp (Ctenopharyngodon idella) CI01000066_00597946_00601637 FBXL13, FBXL14B, FBXL14, FBXL14.S, FBXL14A coding CI01000066 null 597710 ~ 601637 (-)