AMCG00006908


Basic Information

Item Value
gene id AMCG00006908
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 25516575 ~ 25518323 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006908
ATGCTCAAAGTGACCAAACAATCTCATACCAAAGGATACAACCACTTTCGGTACACACAGAGGGTGGAAGAGAAGATGGAGGAGCTCATGGCAGCCATGGAGAAGGTGAAGCAGGAGTTGGAGTCCATGAAGGCCAAGCTGTCGTCCACGCAGCAGTCCCTGGCAGAGAAGGAGGCCCACCTGACGACTCTGCGGGCCGAGCGCAGGAAGCACCTGGAGGAGGTTCTGGAGATGAAGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006908 True 240 mRNA 0.55 2 25516575 25518323

Neighbor

gene id symbol gene type direction distance location
AMCG00006907 LOC108442871 coding downstream 68163 25400710 ~ 25448412 (-)
AMCG00006906 LOC107656325,LOC106609811,LOC107658849,LOC107572035,LOC107726030 coding downstream 203134 25309625 ~ 25313441 (-)
AMCG00006904 adipor2,LOC107726009,LOC105910465 coding downstream 258008 25242554 ~ 25258567 (-)
AMCG00006902 NA coding downstream 371234 25131812 ~ 25145341 (-)
AMCG00006900 LOC106609805 coding downstream 547102 24962174 ~ 24969473 (-)
AMCG00006909 LOC108442871 coding upstream 26990 25545313 ~ 25671743 (-)
AMCG00006913 NA coding upstream 206916 25725239 ~ 25735881 (-)
AMCG00006914 NA coding upstream 228813 25747136 ~ 25778618 (-)
AMCG00006915 atp6v1e1,LOC107085735,LOC100708725,LOC102197685,LOC102784574,LOC101477634,LOC106514808,LOC106914460 coding upstream 320432 25838755 ~ 25847485 (-)
AMCG00006920 NA coding upstream 369934 25888257 ~ 25893080 (-)
G113375 NA non-coding downstream 117877 25395536 ~ 25398698 (-)
G113374 NA non-coding downstream 124257 25391796 ~ 25392318 (-)
G113301 NA non-coding downstream 843077 24671788 ~ 24673498 (-)
G113225 NA non-coding downstream 1140646 24373692 ~ 24375929 (-)
G113212 NA non-coding downstream 1180661 24331087 ~ 24335914 (-)
G113389 NA non-coding upstream 198202 25716525 ~ 25716987 (-)
G113390 NA non-coding upstream 200094 25718417 ~ 25718792 (-)
G113391 NA non-coding upstream 201039 25719362 ~ 25719575 (-)
G113393 NA non-coding upstream 220231 25738554 ~ 25738867 (-)
G113395 NA non-coding upstream 222745 25741068 ~ 25745985 (-)
AMCG00006866 NA other downstream 1945442 23568155 ~ 23571133 (-)
G113050 NA other downstream 2109368 23404175 ~ 23407207 (-)
AMCG00006854 NA other downstream 2558269 22953176 ~ 22958306 (-)
AMCG00006841 NA other downstream 3318911 22130495 ~ 22197664 (-)
AMCG00006813 NA other downstream 4552013 20854057 ~ 20964562 (-)
G113530 NA other upstream 981692 26500015 ~ 26500681 (-)
G113645 ptn,LOC106609498 other upstream 1884277 27402600 ~ 27527348 (-)
G113775 LOC100846954 other upstream 2748939 28267262 ~ 28292598 (-)
G113833 NA other upstream 3192896 28711219 ~ 28812548 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_027101 ERC1 coding NC_007115.7 CM002888.2 8213063 ~ 8515824 (+)