AMCG00006912


Basic Information

Item Value
gene id AMCG00006912
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 25829474 ~ 25836610 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006912
cttttgatttccaGGTTGGATTGTCTGATTAAAACTGTTCGGTCTGAAGGCTATTTTGGAATGTATCGAGGTGCTGCAGTTAACCTTACTTTAGTGACCCCAGAAAAAGCTATCAAGCTAGCTGCCAATGATGTCTTCAGACAACAGCTCTCCAAGGATGGCAAAGGCCTCACACTATACAAGGAGATGTTAGCAGGTTGTGGAGCTGGTACCTGCCAGGTCATTGTGACTACACCCATGGAAATGCTCAAAATCCAGCTCCAGGATGCAGGGAGACTTGCTGCCCAGAGGCCTGTGCCGGCTGAAAGTATTGCCACTTCCCTGCAGGCTCCCCAGCCCACTGGCAGCCCCCCCCCTGCTCCCCAGCGCCCTTCCGCCACCCAAATCACCAAACAGCTGCTGCGGACCTGCGGGGTGGCCGGTCTCTACAGGGGAATGGGTGCCACCCTGTTCAGGGATGTTCCCTTCTCCATGATCTATTTCCCCCTGTTTGCCAATCTCAATGACCTGGGCCACAGCACCCCCGAGGAGAAGGCCCCCTTTGTACACTCCTTCGCGTCGGGCTGTGCCGCCGGCTCCGTGGCAGCGGTGGCAGTCACCCCTCTCGATGTTATCAAGACTCGTTTACAAACCCTGAGAAAAGGTGTCGGGGAAGACACGTACAGTGGCATCATTCACTGCACCAGGAGGATCTGGTCCAGGGAAGGGCCGTCTGCCTTTATGAAGGGCGCCGTCTGTCGCGCTCTGGTCATAGCCCCTCTGTTTGGGATCGCTCAGGGGGTGTACTTCCTCGGAGTCGGGGAGCGCATCCTGGAGGTTTTCGGTTAGATACAGCCCAGGAGCTCAATACTGCAGTCGAGGGCTCCTTATATTTATAGCTCTTACCGTTTATACACTTCAGATGTTCAAAGTTGCGGTGCTTAACAAGACTTGAGTATCTGACTTAATAAGGGTTGTCCATTAATGGTGTCATGCACAGTCATCTACAAAGAGGGGAAAGGGATGTGATGTGTGATATCATGaggcaatttaaaataataataataataataataatgtgcttttatttgctCAAACTGATAGGTCTATATGTTTCACACATCTTGTTAGACTGACATTCCAGCCTAATgcttttataattgtttaatatttttataagaCAAGTTTATGTTAAACTAATGTgatttgttgcatttgttttaatctgatcACCGAAAACGGAATATTATTAGTTTTGCATTACATAACAATTCTGTAACCTCAGTATCCCATCgaaaacacacatgaaacatAACTACTTTgatgggagggggtggggtttaAACACTACAATTTTGCATGACACCATTAATGGATCGTCTCGCAGACAATACAGTTACTTTTCAGTGTCCTATTTTCTGGACAATGctgatatattttgtgaaagCTTAAATTAAGACAAAAAGTTTACTTACAGTGTAAAAATATTTCCCCCTTCAAAATAAGGTTTtcttaaataagtaaatacagcACTATAAATGACGTGGATTGATCAGGAGAttccttgtttttgtaaaaCTTTTGGAATactgtacaaacaaaataagtgtaacagCACCTACTAAGCTTCATTATTAAGCAAGATGTTTATTTAAccaattataaaaatgattttcatattttaatcttcTGAACAGCTTTTATAGTCTCCAATAATATTCATCTCAGTTCTGAATGCTGAATGTCAATAACATCGAGTCTGTTGTCAGTTAATACTTTGCTTTGTTCAAACCTGAGATTTTCTCTATGATTTGTACATAGCTTCCCCCTGTCTTTTGCAAATTCCTTTTTTGCTGCTGCcatggaaataaatcaaatgttctTATAAGCAGTGACAgtgtaattgtctttttttaactgCTGAATTAAATTAGTGTGagg

Function

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006912 True 1920 mRNA 0.43 7 25829474 25836610

Neighbor

gene id symbol gene type direction distance location
AMCG00006916 NA coding upstream 7004 25810563 ~ 25822470 (+)
AMCG00006910 NA coding upstream 107861 25715827 ~ 25721613 (+)
AMCG00006905 fbxl14b,LOC106590767,LOC107580311,LOC107656333 coding upstream 489416 25336345 ~ 25340058 (+)
AMCG00006903 NA coding upstream 615114 25156086 ~ 25214360 (+)
AMCG00006901 NA coding upstream 715135 25078387 ~ 25114339 (+)
AMCG00006911 NA coding downstream 14795 25851405 ~ 25861865 (+)
AMCG00006917 LOC107596953 coding downstream 75745 25912355 ~ 25937570 (+)
AMCG00006921 nup205 coding downstream 113076 25949686 ~ 25972112 (+)
AMCG00006927 NA coding downstream 359707 26196317 ~ 26203741 (+)
AMCG00006928 NA coding downstream 398242 26234852 ~ 26260252 (+)
G113394 NA non-coding upstream 83615 25740983 ~ 25745859 (+)
G113383 NA non-coding upstream 104803 25722881 ~ 25724671 (+)
G113373 NA non-coding upstream 132066 25697197 ~ 25697408 (+)
G113372 NA non-coding upstream 140363 25688735 ~ 25689111 (+)
G113358 NA non-coding upstream 408599 25420658 ~ 25420875 (+)
G113409 NA non-coding downstream 56047 25892657 ~ 25894634 (+)
G113467 NA non-coding downstream 159034 25995644 ~ 25995909 (+)
G113469 NA non-coding downstream 159437 25996047 ~ 25996264 (+)
G113534 NA non-coding downstream 718077 26554687 ~ 26554909 (+)
G113537 mtpn,LOC106576424 non-coding downstream 771049 26607659 ~ 26640179 (+)
G113369 LOC108442871 other upstream 211029 25618067 ~ 25618445 (+)
AMCG00006893 ndufa9,LOC107572617,LOC107686627,LOC107732787 other upstream 1242355 24509003 ~ 24587119 (+)
AMCG00006884 ccnd2a,ccnd2,LOC106573197,LOC106561356,LOC107575166,LOC107686624,LOC107732799 other upstream 1493558 24304696 ~ 24335916 (+)
AMCG00006878 ndufb2,LOC102790702 other upstream 1793362 24032089 ~ 24036112 (+)
AMCG00006865 hipk2 other upstream 2274733 23509149 ~ 23554741 (+)

Expression


Co-expression Network