AMCG00006914


Basic Information

Item Value
gene id AMCG00006914
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 25747136 ~ 25778618 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006914
ATGTACCTGCTGACAGACCTCCCTGGCTCCCCTGAGCTGGAGGAAGCCCTGTTCATACAAGACACTGAGTTTTTGGTGGAGCTGATTGCCTCTCTGCTGCAGGGATGCTACCAACGTACAGACATAACGCCCCAGGCGTTCCGACGGTACCTGGAGGACATCATCAATTACCGCTGGGAACTGGAGGAGGGGAAGCCCAACCCCCTGAAGGAGGGGGCGTTCGAGGAGCTGCCCGCCCGCACGCAGGTGGAGCTGCTGCACAGGCTGTGCGACTACAGGCTCGACGCTGCGGACGTCTTCGACCTCCTCAAGGGTTTGGATGCTGATAGCTTGCGGGTTGACCCTTTGGGAGAGGACAGTGAGGGCGCCCTCTACTGGTATTTCTATGGAACACGCATGTACAAGGAGCAACCAGTGCAAGTGAAGGCTGTTACACAGAGTGAGTTGGAAAGCATGAAAAAAGAGGAGAATGGATTGGCGGACCCACACACAGGCACTGAGAGCAAACGAGGGGCCTGGTCTCTAGTATGTGCCACCGAAGAGGAGTGGCAGAGCCTGGCTGACAGCATCAAAGGGAAAACCTCCTCCAAAGACCGACAGCTCCACAAGCTGCTTATTGAGAATTTCATCCCCGAGATCAGTAACATGATCATATACAAGGAGAAGCAACGTCAAGAAAAGCTGTTGAACATGGCTCCTCGGAGAAGCTCTGACCGGCTAACAATCAAACGCATCATACAAGAGGAAGAGGAAACGCAGATGGCCATTGCAGAGGTGGAGCAGCAGAAGCGCAGAGAAGAGGAGGATTCGGACCGGCAGTTTGTGCTGGCTGAGCAGCGCAGGGAGTTCGAgaagcagctggaggaggaacGCAGGCGGGAGGAGGAAGACAAGGTCAAAGCTGTGGAAGAGCGGgccaggaggaggaagatgagggaggagaaggCCTGGCTCCTGTCCCAGGGCAAAGACCTTCCCCTAGAGCTGCGCAACCTGGAGCCCCACTCACCTGTCACCAGAACCAGGAAAACCAAAGAATTctaTGAAATAGATGATGATTACACAGCTTTGTACAAAGTTTTAGATGCTTTGAAGGCACACAAAGACTCTTGGCCCTTCATGGAACCTGTCGATGAATCATACGCTCCAAATTATCATGACATCATTGAGACCCCAATGGACCTGTCAACGATTGAGAAGAAGCTTAACGAAGGGCAATATATTGCAAAAGAGGAGTTCATCTCCGACGTGAAGCTCATGTTTGAAAACTGTCAGGAGTACAATGGAGAAGATAGTGagTACACGAAGATGGCGGAGGCTCTAGAGCGCTGTTTTAACAAGGCCCTGCTCAAGCACTTCCCCCAGGAGGACGGCGACACAGACGAAGAGTTCAAGGTCAGCAGCGAGGACAGGGAGCGCAGGGAAAGGCGCCGGAGCCGAGCACAGCGCCACAGTGGACCGGACGTGCTGGCCAGGGTGGCGGAACAGGCCCACCGCCGACGCACCCCCTTCAATGGGAAGGGCCAAGCACACCCCGAAGAGGAGAAACGGAAACCAGCCCCTCAGCCCCAGCCAACATCCTGGGCTAATGGGCCTCTACCCAGCCAGGGCTTCCCATCTGCACAATACACCTCAGTGGCTGAAAAGAAGTCCCCACTCTACCAGCCACCCCACCCGAGGCTGGGGGAGCCCAACAGACACCACCTACCTCAGCAATTAAACATGCAGCCTTCCCCTGGATTGAATGATCAGCTGGGCCCAAAACTGATGGGACTGGACTGCAAAGCTTCACCAACACTGCCACCTCAACCACAGCATCAGCAGCCACATCCGCCGTACGTGGGCCCCACTCACGGGCCATCTCTGGGGCCAAGGCCTGCGGCACTGCAGTCAGGTGGCCTCTGTGCCCCTCCACCAGAGGGCAGCTTGTACCCTTCTCAGCAGAGACCTGAAGGAGTGGTCAGACACCCAGGCGGGGGGGCAACTTTTGCGGGGCCTGATATCTCCCCACTGTCTGCTCCTCAGAATAACATGTACCCTCACTTCCGGCACCCCAGCGTAGCCCTGCCCCCTATGTGGTCAGGGGTGAATGGCCTTGGGCAGGAGAGACCCTCAGCACCTGGACTCGAGCAGAACCCAAACTGTCTGCCGCTAAGACCTTTCAACCCTGCCACCATCCGTCCCCCACCTCCACCCTCAAAGCAGTGGCCAGACCAGGCGCCCAGTTACTTACCTCACAATGGCCAGCCAGTAGGTCTGTACAGACTGCCCTGTGGTGCCAGCTCCCCGGCACCCAGCGCTCCACGGGGTGATCCTGTTCACCGGCCTCCTGCCCCCACCGTCCCCACCCAGGAACACAGGGCACACCTGGGCTCCATGCTTGATAGCCCCGAAATGATTGCCCTGCAGCAGCTTTCGGCCTCCTCCTGCCCCCTCGGGAGCCCATCCCGCCAGCTCCTCTCTCAGCACCTTGGTAACTTCCAGCAGTCCTCAcgtgcccccccgcccccccagcaCCTGCCAcaaccccctcctcctccagaaATACAGCTGCTGAAGCCCGCCAAAGACAGCAGCGGGGACAGACAGAGCAGCCACACAGAGGACGCTTTCAGGAAAGGAATAACATCTGAGCCAAAAATGGCTGAGCCCATTCAGTCGGCTAGAGTTGCTCCTGTTCCGGGAGAACAAGAGAGGAAATCTGTCCCGAGTCCAACAGAAACTCCCAGCAGACCCTCAGGTGAGGGGATTCAGAGCCCTTCTGCTCCTGACCGGGGGACCTCCCAGGACAAAGGCCTTACAGACCAGACTCCTATGCCCGGACACCCGCAGGGAACAGAAACCTGTGTTAGAGACAGTGAGAAAGCCCCAGAGCAGAGCCCCCAGGATGAAAACCACAAGAACGCAAGTGAGCCAATCTCCAAAACTGAGCTGAGCAAGGAGGTGGAGGCCAAATCGGATCTTAAACCGCTCAATGATGCTGGGATGAGGCCACCTAATGGGCATTTCAAGGAGCAGAGCTTTAATATAGCACAAGAGAATCAACTGAGCAACGTGGGTCATAGAGCAATGGCCACTATGAACCCTACAGCATCTCCTTATGAACTTGTCCAGAAGAATGAGGCCCAGGTCcaatacaacaacacaaatggGCCTAGACACGCCACTTATGCAATGCCCATGGGCAGGCAAATGGTAGTCCATAATAGGCAGCCCTTCTCCAACCAGGCCCTGCCCCAAAACATGCCTCAGCACCGTGGCCCTGTCCGATATCCCCATTTCCACCAGCAAGGGGCAGCGTATCCTTACCCCATGGCTCAAAACCCTCAAGGCAACTCAAACATGTTCCAGCAGTACCAGCAGCCACACTACTATTCCCAGGCTCAAGGTGGCAATGGGGGAGGGGGCTTTCCTGCAGAAGACTGGCAAAGGCCACCCTACCAGCCTCGACACCCCGTGCCATCCAATGCTTACATGCCCATGGCCAGCGCCAATGTCAATGGAAGGCTACGGGAAAGCAGCATGTCACCTCAGGGCTCAGAAAGCTCAACCAGCAGTTTGGTCTCTCCAAACCCAATGTCAGAGGGAACTAGGAGCAGCTCTGCGGAGATCAGGGAGGTAGCTAGTCCAATAAAGCCGGCCAGAATAGAAGAAGATGCAGAGAGGCCCGAGAGCCCCAAGGAGATCCTGGACCTAGACAGTCACAATGCAGTGGCCAGGAGACGCAGTGCCCAGCCCCCTTCCATGACTGGCTTCATGTATGACCCACGCGCAATGCACCCTGGGATGCAGGAGGGGGCCAGTGGTTCTCCATCCCACATGATGGCCCATGCTTCTTATGGTGCCCACCCTTTCACCGCCAATCCGTACCAACCCCAAAGGCCTCCGCATCATTTGATGCAAGCCATGCACCATCCCCAGCATGTAGGCTACCCCCAAGGCCAACCCAGAATGGCCATGTACAGACACCCTGACCCAAGGATGGGCCACTTCCAGGGCATGATGATCCAGCAGAGAGTGCCAGGACCGGTGACAGAGCAGTACCTCCGCCCAGGGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006914 True 4059 mRNA 0.57 16 25747136 25778618

Neighbor

gene id symbol gene type direction distance location
AMCG00006913 NA coding downstream 11255 25725239 ~ 25735881 (-)
AMCG00006909 LOC108442871 coding downstream 75393 25545313 ~ 25671743 (-)
AMCG00006908 NA coding downstream 228813 25516575 ~ 25518323 (-)
AMCG00006907 LOC108442871 coding downstream 298724 25400710 ~ 25448412 (-)
AMCG00006906 LOC107656325,LOC106609811,LOC107658849,LOC107572035,LOC107726030 coding downstream 433695 25309625 ~ 25313441 (-)
AMCG00006915 atp6v1e1,LOC107085735,LOC100708725,LOC102197685,LOC102784574,LOC101477634,LOC106514808,LOC106914460 coding upstream 60137 25838755 ~ 25847485 (-)
AMCG00006920 NA coding upstream 109639 25888257 ~ 25893080 (-)
AMCG00006919 NA coding upstream 120933 25899551 ~ 25911582 (-)
AMCG00006918 NA coding upstream 159089 25937707 ~ 25949127 (-)
AMCG00006922 NA coding upstream 197872 25976490 ~ 25993105 (-)
G113395 NA non-coding downstream 1151 25741068 ~ 25745985 (-)
G113393 NA non-coding downstream 8269 25738554 ~ 25738867 (-)
G113391 NA non-coding downstream 27561 25719362 ~ 25719575 (-)
G113390 NA non-coding downstream 28344 25718417 ~ 25718792 (-)
G113389 NA non-coding downstream 30149 25716525 ~ 25716987 (-)
G113431 NA non-coding upstream 87767 25866385 ~ 25867279 (-)
G113468 NA non-coding upstream 217023 25995641 ~ 25995929 (-)
G113479 NA non-coding upstream 222828 26001446 ~ 26038323 (-)
G113573 NA non-coding upstream 1280751 27059369 ~ 27059594 (-)
G113586 NA non-coding upstream 1376917 27155535 ~ 27155857 (-)
AMCG00006866 NA other downstream 2176003 23568155 ~ 23571133 (-)
G113050 NA other downstream 2339929 23404175 ~ 23407207 (-)
AMCG00006854 NA other downstream 2788830 22953176 ~ 22958306 (-)
AMCG00006841 NA other downstream 3549472 22130495 ~ 22197664 (-)
AMCG00006813 NA other downstream 4782574 20854057 ~ 20964562 (-)
G113530 NA other upstream 721397 26500015 ~ 26500681 (-)
G113645 ptn,LOC106609498 other upstream 1623982 27402600 ~ 27527348 (-)
G113775 LOC100846954 other upstream 2488644 28267262 ~ 28292598 (-)
G113833 NA other upstream 2932601 28711219 ~ 28812548 (-)

Expression


Co-expression Network