AMCG00006920


Basic Information

Item Value
gene id AMCG00006920
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 25888257 ~ 25893080 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006920
TAGAAACCGAGAAGATGGCCTGTTTTAATAGCTAGATACCCAGCGACTGCACATGTGAGTTTACACTTTTGTTACAATCGTGAGTTTAGTTGTTCCTGTTTCTAACTTCCTCTTTTATCGCTATAAAACCGAAAGCAACTAGAAACTAACAACCTAGTCAACACCGATACAGGCTTTAACGCGTCCATTTGCTCCGTTGTGTCTCCGTGTTGCGTTTAAACATTCGCACTGGGTTTGGACGGTCTTCACTTGCTTGTCTTTTTTTACGCGCGGTCTGTttcacaagtaaaaaaaaaacaatgtcgCGTTCAACTCCGGCTGTGCCTTGTCGCTCACCTTTTGCTCAATAACCCTCTTTTCTCCTCCTGTATGGGACCCGGGATTGGACCGGTTCTGCGGTGAAGTGGAGACGTTGAGCGACTGTTGGACAAACACTATGGAGTACATCCACAGCAGAGATTACAGCACAAGCTTAATCCTCCTCAGCTTCTTGAAGCAGCAGGGTTGCAAGAATGAGGAATTCGCCAAGGAACTGGAAAGCTTAGGGGAGGAACTGAAATTGAGCAGGGACGTCAATTCAAATCATGGCGACTACGGCAGGGACTGCTACTACGACGATGATGATGGGGAGCTGCAGGCCGACGGGAACTTTTGTCCTTTTTCAAACCTCAGCGGTTTGGCAAGAGGGATGCAGGCTGATGTCCGAGAATCCCTTCCAATGAATGCGGTAGATGAAGCAGCACTGAGGAACGTGGCTGTGGGCCTCATTGAGATTGCTGACCGGCTGGAGCAGAGTGTCCTTACTCGGGCCTCAGAGAATTTAACCAGGAGACTGCAGAACCTTTCTCCGGAGGACTGGCACAACACTCTATCCTATGAGGTGCAGGATCTGATGCAGAGACGGCTGCCAACGCTGTGCAATCTCCCCCAGGAGAGAGTCATGCTGGTCCTGACCATGGCTCTGGTGAAGCAAGTCTGCGAGCGAGTCCCCACCCTCCTGCACAGCCTCTTTAGTACAGCGGTGCAGTACATCAGTGCCATACGGCCCCGGTTTACATGAAACGCTAGATTGTTTGCCAGTTTTAAGCCTTCATTTCAACTGccggtttgtttttcttcagaaaaacaaaaaaaacatggaaaatttaaaaataatttgaactatgtatatatagctttt

Function

GO:

id name namespace
GO:0042981 regulation of apoptotic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006920 True 1180 mRNA 0.48 4 25888257 25893080

Neighbor

gene id symbol gene type direction distance location
AMCG00006915 atp6v1e1,LOC107085735,LOC100708725,LOC102197685,LOC102784574,LOC101477634,LOC106514808,LOC106914460 coding downstream 40772 25838755 ~ 25847485 (-)
AMCG00006914 NA coding downstream 109639 25747136 ~ 25778618 (-)
AMCG00006913 NA coding downstream 152376 25725239 ~ 25735881 (-)
AMCG00006909 LOC108442871 coding downstream 216514 25545313 ~ 25671743 (-)
AMCG00006908 NA coding downstream 369934 25516575 ~ 25518323 (-)
AMCG00006919 NA coding upstream 6471 25899551 ~ 25911582 (-)
AMCG00006918 NA coding upstream 44627 25937707 ~ 25949127 (-)
AMCG00006922 NA coding upstream 83410 25976490 ~ 25993105 (-)
AMCG00006923 NA coding upstream 199817 26092897 ~ 26105386 (-)
AMCG00006925 NA coding upstream 241091 26134171 ~ 26140819 (-)
G113431 NA non-coding downstream 20978 25866385 ~ 25867279 (-)
G113395 NA non-coding downstream 142272 25741068 ~ 25745985 (-)
G113393 NA non-coding downstream 149390 25738554 ~ 25738867 (-)
G113391 NA non-coding downstream 168682 25719362 ~ 25719575 (-)
G113390 NA non-coding downstream 169465 25718417 ~ 25718792 (-)
G113468 NA non-coding upstream 102561 25995641 ~ 25995929 (-)
G113479 NA non-coding upstream 108366 26001446 ~ 26038323 (-)
G113573 NA non-coding upstream 1166289 27059369 ~ 27059594 (-)
G113586 NA non-coding upstream 1262455 27155535 ~ 27155857 (-)
G113587 NA non-coding upstream 1272099 27165179 ~ 27165398 (-)
AMCG00006866 NA other downstream 2317124 23568155 ~ 23571133 (-)
G113050 NA other downstream 2481050 23404175 ~ 23407207 (-)
AMCG00006854 NA other downstream 2929951 22953176 ~ 22958306 (-)
AMCG00006841 NA other downstream 3690593 22130495 ~ 22197664 (-)
AMCG00006813 NA other downstream 4923695 20854057 ~ 20964562 (-)
G113530 NA other upstream 606935 26500015 ~ 26500681 (-)
G113645 ptn,LOC106609498 other upstream 1509520 27402600 ~ 27527348 (-)
G113775 LOC100846954 other upstream 2374182 28267262 ~ 28292598 (-)
G113833 NA other upstream 2818139 28711219 ~ 28812548 (-)

Expression


Co-expression Network