Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00006929 |
| gene name | mtpn,LOC106576424 |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 26608543 ~ 26639948 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| symbol | description |
|---|---|
| mtpn | Predicted to be involved in regulation of barbed-end actin filament capping. Predicted to be located in perinuclear region of cytoplasm. Predicted to be active in cytoplasm and nucleus. Orthologous to human MTPN (myotrophin). |
| description |
|---|
| myotrophin |
| id | name | namespace |
|---|---|---|
| GO:0048471 | perinuclear region of cytoplasm | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00006929 | True | 351 | mRNA | 0.48 | 4 | 26608543 | 26639948 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00006926 | NA | coding | downstream | 247092 | 26192389 ~ 26361451 (-) |
| AMCG00006924 | NA | coding | downstream | 422781 | 26184251 ~ 26185762 (-) |
| AMCG00006925 | NA | coding | downstream | 467724 | 26134171 ~ 26140819 (-) |
| AMCG00006923 | NA | coding | downstream | 503157 | 26092897 ~ 26105386 (-) |
| AMCG00006922 | NA | coding | downstream | 615438 | 25976490 ~ 25993105 (-) |
| AMCG00006932 | NA | coding | upstream | 668944 | 27308892 ~ 27309170 (-) |
| AMCG00006935 | NA | coding | upstream | 997272 | 27637220 ~ 27649919 (-) |
| AMCG00006934 | NA | coding | upstream | 1028838 | 27668786 ~ 27677200 (-) |
| AMCG00006938 | NA | coding | upstream | 1165535 | 27805483 ~ 27824074 (-) |
| AMCG00006939 | itfg2 | coding | upstream | 1325019 | 27964967 ~ 27970379 (-) |
| G113479 | NA | non-coding | downstream | 570220 | 26001446 ~ 26038323 (-) |
| G113468 | NA | non-coding | downstream | 612614 | 25995641 ~ 25995929 (-) |
| G113431 | NA | non-coding | downstream | 741264 | 25866385 ~ 25867279 (-) |
| G113395 | NA | non-coding | downstream | 862558 | 25741068 ~ 25745985 (-) |
| G113393 | NA | non-coding | downstream | 869676 | 25738554 ~ 25738867 (-) |
| G113573 | NA | non-coding | upstream | 419421 | 27059369 ~ 27059594 (-) |
| G113586 | NA | non-coding | upstream | 515587 | 27155535 ~ 27155857 (-) |
| G113587 | NA | non-coding | upstream | 525231 | 27165179 ~ 27165398 (-) |
| G113631 | LOC100846954 | non-coding | upstream | 630511 | 27270459 ~ 27363030 (-) |
| G113667 | NA | non-coding | upstream | 1159990 | 27799938 ~ 27800294 (-) |
| G113530 | NA | other | downstream | 107862 | 26500015 ~ 26500681 (-) |
| AMCG00006866 | NA | other | downstream | 3037410 | 23568155 ~ 23571133 (-) |
| G113050 | NA | other | downstream | 3201336 | 23404175 ~ 23407207 (-) |
| AMCG00006854 | NA | other | downstream | 3650237 | 22953176 ~ 22958306 (-) |
| AMCG00006841 | NA | other | downstream | 4410879 | 22130495 ~ 22197664 (-) |
| G113645 | ptn,LOC106609498 | other | upstream | 762652 | 27402600 ~ 27527348 (-) |
| G113775 | LOC100846954 | other | upstream | 1627314 | 28267262 ~ 28292598 (-) |
| G113833 | NA | other | upstream | 2071271 | 28711219 ~ 28812548 (-) |
