AMCG00006933


Basic Information

Item Value
gene id AMCG00006933
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 27324233 ~ 27325720 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006933
ATGGCCAATTCTACCTACACTAATGCCTCTCAAGACAATTACACAATGTCCATTCCAGAGAGCCCCTACAAGACAGTAGAGATTGTTTTCATTGTCCTGGTAGCAGGATCATTGAGTCTTGTGACTGTTATTGGAAACATCCTGGTGATGGTTTCCATTAAAGTCAACAGGAATCTGCAAACTGTCAACAACTACTTCCTCTTCAGTCTGGCCTGTGCAGACCTTATCATTGGGGTTTGCTCCATGAACCTCTACACAGTCTACACCGTTATTGGGTATTGGCCTCTGGGGCCTGTGGTCTGTGATCTGTGGTTGGCCTTGGATTATGTGGTCAGCAATGCTTCAGTGATGAACCTTCTCATCATCAGTTTTGACCGATATTTCTGTGTCACCAAGCCCCTCAGCTACCCAGTTAAGAGGACGACCAAGATGGCAGGCATGATGATTGCAGCAGCCTGGGTCCTTTCTTTTATTCTCTGGGCCCCAGCTATTCTGTTCTGGCAGTTCATTGTTGGTGGGCGAACTGTACCTGAGAGAGAGTGTTATATCCAGTTTTTTTCCAATGCAGCAGTCACCTTTGGCACAGCTATTGCTGCTTTCTACCTGCCAGTCATTATCATGATGGTCCTCTACTGGCAGATATCTATGGCCAGCAAAAGCCGTATCAAAAAGGATCACAGGAAGCCCTCTGGCAACCAAGAAGCTCTCTCCCCAAGTTTGGTACGGGGGCAAATTGTTaaacccaacaacaacaacttgtGTGCAGAGGAAGTAGACAGGGCACAGGTCCTGCACcagaatcaaaataaacatctgtcaGAACAGCATGACGGAAAGCTGCAGAATGGCAAGGCCCCTTCCACAAAatgtggagagggagaggaggcaggCCTGGAGAACTGTGGCCAAGTGGAGGAAAAAGAGAGCTCCAATGATTCAACTTCTGTAAGTGCCATGGCTTCCAACctgaaggaggaggagacagTGGTGCCCATAAAAGATAGTACTACCATTCCCAGCCAGGCCCACACACGCAATCGTACCAAGGCGGAAGGCTCCAAACTCACTTGCATCAAAATTGTGACGAAGTCTCCAAAAGGAGACAGCTATGCTACATCCAACACCACCGTAGAAATTGTCCCAGAAGTTGAGAAACAGAACCTAGTGGCTCGCAAGATCGTCAAGATGACTAAACAGcccccaaagaaaaaaaaggcccCACCATCACGGGAAAAGAAGGTGACTCGGACAATCCTTGCTATTCTCTTGGCTTTCATTGTGACCTGGACACCCTACAATGTCATGGTGCTTATCAATACCTTCTGCACCAGCTGTATTCCCACCCCTGTTTGGACTATTGGCTACTGGCTGTGCTATATCAACAGCACCATTAACCCTGCTTGCTATGCGCTCTGCAATGCCACTttcaaaaagacatttaaacatctTCTCCTCTGTCAATACAAGAACATTGGTGCAGCCagatga

Function

GO:

id name namespace
GO:0007213 G protein-coupled acetylcholine receptor signaling pathway biological_process
GO:0007268 chemical synaptic transmission biological_process
GO:0010459 negative regulation of heart rate biological_process
GO:0005887 integral component of plasma membrane cellular_component
GO:0016907 G protein-coupled acetylcholine receptor activity molecular_function

KEGG:

id description
K04130 CHRM2; muscarinic acetylcholine receptor M2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006933 True 1488 mRNA 0.47 1 27324233 27325720

Neighbor

gene id symbol gene type direction distance location
AMCG00006931 NA coding upstream 553381 26770526 ~ 26770852 (+)
AMCG00006930 NA coding upstream 618069 26704780 ~ 26706164 (+)
AMCG00006928 NA coding upstream 1063981 26234852 ~ 26260252 (+)
AMCG00006927 NA coding upstream 1120492 26196317 ~ 26203741 (+)
AMCG00006921 nup205 coding upstream 1352121 25949686 ~ 25972112 (+)
AMCG00006936 NA coding downstream 290415 27616135 ~ 27627333 (+)
AMCG00006937 NA coding downstream 485465 27811185 ~ 27831056 (+)
AMCG00006950 NA coding downstream 583486 27909206 ~ 27910398 (+)
AMCG00006942 NA coding downstream 588580 27914300 ~ 27935789 (+)
AMCG00006943 NA coding downstream 779888 28105608 ~ 28128135 (+)
G113594 NA non-coding upstream 40913 27262231 ~ 27283320 (+)
G113592 NA non-coding upstream 63161 27260610 ~ 27261072 (+)
G113585 NA non-coding upstream 168371 27155535 ~ 27155862 (+)
G113574 NA non-coding upstream 261388 27062512 ~ 27062845 (+)
G113572 NA non-coding upstream 264639 27059370 ~ 27059594 (+)
G113607 LOC103376870 non-coding downstream 55203 27380923 ~ 27401968 (+)
G113680 NA non-coding downstream 530394 27856114 ~ 27856462 (+)
G113711 NA non-coding downstream 733404 28059124 ~ 28060590 (+)
G113717 LOC107575789 non-coding downstream 752233 28077953 ~ 28078459 (+)
G113741 NA non-coding downstream 812631 28138351 ~ 28138938 (+)
G113400 NA other upstream 1491291 25815055 ~ 25832942 (+)
G113369 LOC108442871 other upstream 1705788 25618067 ~ 25618445 (+)
AMCG00006893 ndufa9,LOC107572617,LOC107686627,LOC107732787 other upstream 2737114 24509003 ~ 24587119 (+)
AMCG00006884 ccnd2a,ccnd2,LOC106573197,LOC106561356,LOC107575166,LOC107686624,LOC107732799 other upstream 2988317 24304696 ~ 24335916 (+)
AMCG00006878 ndufb2,LOC102790702 other upstream 3288121 24032089 ~ 24036112 (+)

Expression


Co-expression Network