AMCG00006936


Basic Information

Item Value
gene id AMCG00006936
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 27616135 ~ 27627333 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006936
GTTGCTTTTCTGACTGACGGTTTTTGGTACGCACCTGTACAGCGaagGGATGAGATGCATGTCCCTTGAACACCCCACTGAGGACCACTGAGATGGCTGATCTTCTGAACAATTTATGTGATGTTCCcctaaagaaaaggaaatgtggCTTTCAGACGAAGTTAGCCTCATCAGAGCAATACATGGCATCTTTGCTCAGTACAGCTGAACTGTCTCTTCAAATACCTCAGAATGCCAATACAAGCTTTCCCATTTGGGAATTGCTACGGGCAAGCAAGGTGGAAGTACTATGGAATGTTACACCATATAAAATTGATATCTGCATTGTTCCTTTACACTCCTACACAATGACTCTCCCCCAGCCCCAAGTTCTGTCTAAAGCTGACCAAGACTGCAGTGCTTACCTTGCAGAGGATGAGTTGGATACTGATCTAGCTTCAATCGTTTATCAGCCTGTCCCAAAGGCCATGTGGGTGGAACAGGCTTCTTTTTATACCAAGCCATATGACAATATTAAGATCTGTGACAAATTCCTTCTAGGAAACTGTAGATTTGGCTTTGAGTGCAACCAACATCACACACCTTATCCCTTCCACTGGCAGCTTCGCAGAGAGGACACATATCAGTGGGTCAGTGTCTCGTATTCTGCACAGATCAAGCTGGAGAAGCTGTACTGCAACAAGGAAAAAGAACAGGCTACTTTGAAAGAAATGAACCACACATTCACCCTTGATTTTGAGAGCATGACAGTACAAAATTCAGAAATTTATGATAAAGTTAGAAGACTTTCTAACACAACCAATCCAGAATGGAACCCGTATTTCCCTACAGTGTGGCAGATTTATTGGTGGAATGACTTTGACTgggagaaatacaaaaaaTCTATTTCAGAGATTCTGGAGTCTAAAATGGAAGCTGGAAAAAACAAGTGTACTTTCACCATTGGGGTACAGGAGTATGAGCTGGACTTTAGCAGCTTAACCCAGAAGAACCTCAGAACAGGCTTTGAGCGCAGAATTCGCCGACGACCCACCTTCCAATTCAGCAGCTGGTATCCCCCAGTGTGGACAATGATGCCTGCACAAGAAGAATTCACAAGAGTGGAAGTGAAACCCTGTGAAGAAGCCTACCAGAAGATCTATGGGCTTTTCCACAAAACTATGTCTGAGACAATGGTAGAGATTGTCAGTATCCAGCAAATCCAGAACATCTTCCAGTGGGACAAATATAGAAGACAAAAGGATTATATGTTGTTCAAGCATTCCGACAGCTTGAACATTGAGCGCCATTTATTCCATGGAACCACAGAAGCCGCAGTGGATGTAATTTGCAAGATGAACTTTGACCCCCGTGTGGCAGGGAAGAATGGGATTTCTTATGGTCGAGGAAGCTACTTTGCAAGGGATGCCAGCTACTCCAATGGTTTTGCACCTGCTGCTCCCAACGGATATCAGTACATGTTCCTCGCTAAAGTGCTTGTAGGCAAAACAAACTTGGGAAAGCGGAAATACTACAGACCTCCTCCTGTTTGTCCAAAAAAAGCTGGAAGCGATTTATATGATGCCTGTGTTAATCAGCGGTTAGATCCATCAATTTTTGTTGTGTTCGATAGCTGTCAGTGCTACCCTTACTACATGATTAAGTACAGGGCTTTGTCTGATGTTGTCAATGTCTTTGAATAACATCAATATGCTGTGTATTCTGGTTCACAGTAGCAGAAGAAGCCTGACAGCGTGATATAGGATGGATCTCTCATTAAGTCATGGACTACCCAGCATATGCTAGGGAGTGCAGAAGTTGAATGATTATGGCTATGATAATCTGGGACATATATTCAGAATGACCTgacaacatttgtttattattaatttattatatataaggctagtatgtttaattttataaccTGTATTCCTCTGGAcaaatgggttttgttttcagaaactcATCTACTGTGTTAAGTGATACCTCCCCACACCGAAAAAATCTACACTGCATCTTATAGACTTTTAAATGCTCAATATAGGAACTAAAACCATAGTACTGCAGGTCACCTATTTCTTCTCACTGAGCCTGTTGCTCATACAAATTAGTCTTCACATTTTCAGATAATGTTGCTCTTGTCTACATTATTATAACTGACACCATACACCGCCTTGACTAGCACTTTGAATATTAGCATGTTTGGCTTTATAGCTCGAACCTGATGCGTCTATGATATTGAAAGTCACCTTCACAGAGATTACatatcactttgtttttgtctgttgaaCCATACTCATTAATCCACCTTTCTTCTCCATTAAACTACGGGTGCAAAGAATGCTCAAAATAGAGAATTGCgattaattgtgttaaaaaatatgaatgtgttattcagtttaaattaattgtttttatttaagaggTTTTCAGTGCTATTGTGTTCTGTAAGTGCCTATTAGCTAGCTGTAGGATGATTCATGCAGTCTCTGCTTTGGTGGCGGAAGTATATGGATAGTGATACAAGAACTATATCCTCATGCATAGCTGAATAAAATAATGGGGAGTTACCTGTGTGTCTAGTGGCTGTGTCACCACTTCCAGCAGCAACTTGATTTTGCTTTGACCCTGTACTGACCAGGCATTAGTCTTAGTGTTTGAGATCTGATTAAATCAGGCTTTTAGGTGGTGTAACAGTAATGTAAAAGTTACCATCCTGTTACTGGCAGATCATCAACTGCACTCAAACTAAATACTTTCTAATTGTCTCTTATAAGTATGTTATCTGTTCTGTTATGTTTTTTGGAAGAAAGGAATATCACATCATAggcactgtttttattttattttatgttctctATTCCTGCACTTTGATTTTGCTGCACTGTATAATTTCTGTCCTAGGACCCTGTGTTTTATGTGACAAAATGTATTAGGCTtcacttcattcctcccagcACAGTGCAGTCATGTAGAATTAAACCACTCATTGATTAATCGCCCATAGTATCATCAATTAGTCATTACATTAAtgaactttaattaattaatgaacacaacaaaaaaagtgtgaCAATCCCCCCCAGGAGAATtcctgagaaaaaataaaaataaaaggaacacATCATTTCTCATCAAAAGTCTAACATAAAACTGCACAGATTCCTTCAGtgctatattataatacatatgtattgcAAAGATAACAATTTTAAGTTGTTCACAAGCAGCACGTTAAATTTCACTTACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006936 True 3233 mRNA 0.39 6 27616135 27627333

Neighbor

gene id symbol gene type direction distance location
AMCG00006933 NA coding upstream 290415 27324233 ~ 27325720 (+)
AMCG00006931 NA coding upstream 845283 26770526 ~ 26770852 (+)
AMCG00006930 NA coding upstream 909971 26704780 ~ 26706164 (+)
AMCG00006928 NA coding upstream 1355883 26234852 ~ 26260252 (+)
AMCG00006927 NA coding upstream 1412394 26196317 ~ 26203741 (+)
AMCG00006937 NA coding downstream 183852 27811185 ~ 27831056 (+)
AMCG00006950 NA coding downstream 281873 27909206 ~ 27910398 (+)
AMCG00006942 NA coding downstream 286967 27914300 ~ 27935789 (+)
AMCG00006943 NA coding downstream 478275 28105608 ~ 28128135 (+)
AMCG00006944 cwf19l1 coding downstream 520505 28147838 ~ 28188827 (+)
G113607 LOC103376870 non-coding upstream 214167 27380923 ~ 27401968 (+)
G113596 LOC100846954,LOC107575789 non-coding upstream 253091 27268971 ~ 27363044 (+)
G113594 NA non-coding upstream 332815 27262231 ~ 27283320 (+)
G113592 NA non-coding upstream 355063 27260610 ~ 27261072 (+)
G113585 NA non-coding upstream 460273 27155535 ~ 27155862 (+)
G113680 NA non-coding downstream 228781 27856114 ~ 27856462 (+)
G113711 NA non-coding downstream 431791 28059124 ~ 28060590 (+)
G113717 LOC107575789 non-coding downstream 450620 28077953 ~ 28078459 (+)
G113741 NA non-coding downstream 511018 28138351 ~ 28138938 (+)
G113743 klhl42,LOC106576288,LOC106609448 non-coding downstream 513950 28141283 ~ 28142251 (+)
G113400 NA other upstream 1783193 25815055 ~ 25832942 (+)
G113369 LOC108442871 other upstream 1997690 25618067 ~ 25618445 (+)
AMCG00006893 ndufa9,LOC107572617,LOC107686627,LOC107732787 other upstream 3029016 24509003 ~ 24587119 (+)
AMCG00006884 ccnd2a,ccnd2,LOC106573197,LOC106561356,LOC107575166,LOC107686624,LOC107732799 other upstream 3280219 24304696 ~ 24335916 (+)
AMCG00006878 ndufb2,LOC102790702 other upstream 3580023 24032089 ~ 24036112 (+)

Expression


Co-expression Network