AMCG00006937


Basic Information

Item Value
gene id AMCG00006937
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 27811185 ~ 27831056 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006937
AAACTGAATTAGAAATTCaggtctattattattattataaagattTTGTACCATGTTGGAAATAAGAATTTAGACGAAGTACAAGCTTTGGGTGAGGACGGCGGAGCTTAATTTCAATCGTTTTTCTTCTAATATGAAGAGAAACAGACATTGCAGAGGGCTATTCAACATTAATACTGCCTGAACAGGATGAGAGACAGCCCAAGAAGGCCCTTAATCCTTAAAAGGAGGAAGCTCTCCCTGCCTAAGGAGGAGGACAATATTCCCAGGGATGTGCCAGATGGAAGGCAGAAGGAGACAGCCACCTCCAGTTCCCAGCAGATCCCAGATGGAATCCGGATCCTGGATCACCCCTCCATGCCCAACACTCAAGTGGTGGTCATCCCTAAGACTGCAGACCTTCAGAGTGTCATTGAAGCTTTGACTGCCAAAGGGAAGGGGTGTGGTCCACAAGGACCCAATAAGTTCATCTTGCTGAGCAGTGGAGGGGGGGTGGATGAGGGCCCTGCTTCCCCAAAACACAGCAATGTATTCCTTCCTGACAGAGATGGGAGTGGAATTTGTGTAGACCCCCTGCCTCTGTCTGGACACTTTGAAGCCAATGTGGTCCGTGCAGAGTTTACCAGTATCTTTGCAGGCAGCAGCAAGTCTTTAACAGAGATAAAACCTTTGAATAAGGAACTGGATTGCTCCCCATTAGATGAGAGTCTTACTAATATTCAGTGGTTAGGGAGAATGAGTACTGACAGCTTGAAACCCGGCCCTGTTAAGATCGCATCAAATaaggaaaacaaggaaaacaacgATTTAGGTGCCCAAGTGATACAGGTAAAAATGGAAGGTGATGAGGGACTTTCTTCTGTCAACGACACCCTGTCTGAAAGGCCCCCCTATTCCTACATGGCTATGATCCAGTTTGCAATCAACAGCAAAAAGAGCAAAATGATGACCCTGAAAGAGATTTACACAGAGACTTCTCCAGATGGCAAGATTTCCTACTGGACCATTCGGCCAGAAGCTAACCGCTGTCTGACACTGGATCAAGTTTATAAGCATCAGAAGCGAGGTCTACCTGAGACAAATAAATCTGCACTTCCATGTGGCTCTGACTCTTACCTGGTCCCCTTCCAGCTGCCCCTCAACCCACCCATCATTCTCCCCGCAGCTACACAGCTCCCACTATCTGCTGCCCAGCACAATAGCAGCTCTACATCCAGCAGTGCTCTTAGATGTGGAAAAAGGGTTCGCATTGCTCCTAAGATCCCTCAGACTTCTGAAGCCTCAGCTCTAATCCAGCCCCAGCGAGAGCCATGGAAGGACAAGCAACTCTATGTTTGCGGCAGCCAAACCCCAGAGGCTCCTGTAGACATACTACCCAGAGAGCGGAAAGAGACCAGCAGCTCCAGGAGAAAACAGCGTCTTGTGCTACCTAGTGCAGAGGAGCCTGTACTTTTGTTTCCTGAGAGCAGCTTCATTGACTCCGGTTTAGCATCTGACCTCTCTGCTTTTCAGGACACTCGAGAAGTAGAGTTGGAAAGCCCTGTGAAGGAGTATGCCTTCAAAACGCCCATCAAGGGAGGTCTGCCCGCCTCCTCCACTCCAAGCAAGGCTATCTCAGGCGAGCCCCCAGTTGTCCCGGGACTATGGAGAACGACTCCACTAAGTAAGCGGAGTCATGGGGTGCTGGACTTCAGCCCCATCCGCACTCCTCGTGGAGTCTCCCTCACCCCACAACGAGAGGATCAAACCCCCTTCAGCTTCAGCAGTACACCTTTCAAGGAGCTGCCCCTCTTTGACTCCCCAAGGGAGCTGCTAAACACTTACTCACCCAGCTCTTTGTCCCGGCTTGGTGCCAGCTCTCCAATTCCAGAGTCTGATGGACTGAAGCAGTGTTCCCATGAGCTGCAAGGTGGGCTGGCAGGGGCAAACCGCTCCCTCACAGAGGGACTTGTGCTGGACACCATGAACGACAGCCTCAGCAAGATCCTGGTGGATATCAGCTTCACTGGGTTAGAGGATGAGGATCTGGGCATGGGGAACATCAGCTGGTCACAGCTGATCCCTGAGCTGAAGTGACTTCCACTTTAAATAAAGTTGCAATAGGATGGtattgaacatttaaatcaaaaatcATTGCCTCCATGTCTTTTCCTAAAGAGGTATTACTTCACTCTGATACGTTTCCACTTTGTTGAAAGAGTTTTATAAGCAGCGTTTCTGGGGAAGTACAGAGAGAATGTTCTGGTGTAATTTATACATGCACTCTGGCAAACGAACATTACTTACTGCCTGTGAAGTCAACTTCCAGCTTCAGTTATGTTCTCTTCAgctcgta

Function

GO: NA

KEGG:

id description
K09406 FOXM; forkhead box protein M

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006937 True 2335 mRNA 0.49 8 27811185 27831056

Neighbor

gene id symbol gene type direction distance location
AMCG00006936 NA coding upstream 183852 27616135 ~ 27627333 (+)
AMCG00006933 NA coding upstream 485465 27324233 ~ 27325720 (+)
AMCG00006931 NA coding upstream 1040333 26770526 ~ 26770852 (+)
AMCG00006930 NA coding upstream 1105021 26704780 ~ 26706164 (+)
AMCG00006928 NA coding upstream 1550933 26234852 ~ 26260252 (+)
AMCG00006950 NA coding downstream 78150 27909206 ~ 27910398 (+)
AMCG00006942 NA coding downstream 83244 27914300 ~ 27935789 (+)
AMCG00006943 NA coding downstream 274552 28105608 ~ 28128135 (+)
AMCG00006944 cwf19l1 coding downstream 316782 28147838 ~ 28188827 (+)
AMCG00006947 NA coding downstream 461964 28293020 ~ 28331354 (+)
G113607 LOC103376870 non-coding upstream 409217 27380923 ~ 27401968 (+)
G113596 LOC100846954,LOC107575789 non-coding upstream 448141 27268971 ~ 27363044 (+)
G113594 NA non-coding upstream 527865 27262231 ~ 27283320 (+)
G113592 NA non-coding upstream 550113 27260610 ~ 27261072 (+)
G113585 NA non-coding upstream 655323 27155535 ~ 27155862 (+)
G113680 NA non-coding downstream 25058 27856114 ~ 27856462 (+)
G113711 NA non-coding downstream 228068 28059124 ~ 28060590 (+)
G113717 LOC107575789 non-coding downstream 246897 28077953 ~ 28078459 (+)
G113741 NA non-coding downstream 307295 28138351 ~ 28138938 (+)
G113743 klhl42,LOC106576288,LOC106609448 non-coding downstream 310227 28141283 ~ 28142251 (+)
G113400 NA other upstream 1978243 25815055 ~ 25832942 (+)
G113369 LOC108442871 other upstream 2192740 25618067 ~ 25618445 (+)
AMCG00006893 ndufa9,LOC107572617,LOC107686627,LOC107732787 other upstream 3224066 24509003 ~ 24587119 (+)
AMCG00006884 ccnd2a,ccnd2,LOC106573197,LOC106561356,LOC107575166,LOC107686624,LOC107732799 other upstream 3475269 24304696 ~ 24335916 (+)
AMCG00006878 ndufb2,LOC102790702 other upstream 3775073 24032089 ~ 24036112 (+)

Expression


Co-expression Network