AMCG00006939 (itfg2)


Basic Information

Item Value
gene id AMCG00006939
gene name itfg2
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 27964967 ~ 27970379 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006939
gGGGATGGGCGTGATGAGGTGGTTGCTTGTGCCTGGGATGGGCAGACATACATCATTGACCATAATCGTATGGTAGTCAGGTTTCAATTTGATGAGAATGTCAATGCTTTTTGTGCAGGTCAATATGCCTGTAAAGATGGGCGGAACAGCCCCTGCCTGGTCTATGTGAGCTTTAACCACAAGATCTACATTTACTGGAGAGTAGAACTTGAAAGGATGGAGTCCACCAATCTGCTGAAAGTTATGGAGGAGAGGCAGGAGTACAGAGGTCTCCTGAACCAGCTTGGTGTG

Function

symbol description
itfg2 Predicted to be involved in regulation of TOR signaling. Predicted to be part of KICSTOR complex. Orthologous to human ITFG2 (integrin alpha FG-GAP repeat containing 2).

NR:

description
PREDICTED: integrin-alpha FG-GAP repeat-containing protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006939 True 291 mRNA 0.48 2 27964967 27970379

Neighbor

gene id symbol gene type direction distance location
AMCG00006938 NA coding downstream 140893 27805483 ~ 27824074 (-)
AMCG00006934 NA coding downstream 287767 27668786 ~ 27677200 (-)
AMCG00006935 NA coding downstream 315048 27637220 ~ 27649919 (-)
AMCG00006932 NA coding downstream 655797 27308892 ~ 27309170 (-)
AMCG00006929 mtpn,LOC106576424 coding downstream 1325019 26608543 ~ 26639948 (-)
AMCG00006941 NA coding upstream 32123 28002502 ~ 28015328 (-)
AMCG00006940 NA coding upstream 46284 28016663 ~ 28047076 (-)
AMCG00006948 klhl42,LOC106609448,LOC106576288 coding upstream 170878 28141257 ~ 28144216 (-)
AMCG00006949 NA coding upstream 247234 28217613 ~ 28223587 (-)
AMCG00006955 NA coding upstream 779883 28750262 ~ 28811479 (-)
G113681 NA non-coding downstream 108506 27856111 ~ 27856461 (-)
G113673 NA non-coding downstream 159814 27802490 ~ 27805153 (-)
G113667 NA non-coding downstream 164673 27799938 ~ 27800294 (-)
G113631 LOC100846954 non-coding downstream 601937 27270459 ~ 27363030 (-)
G113587 NA non-coding downstream 799569 27165179 ~ 27165398 (-)
G113722 NA non-coding upstream 87982 28058361 ~ 28058567 (-)
G113723 NA non-coding upstream 88340 28058719 ~ 28058931 (-)
G113724 NA non-coding upstream 88749 28059128 ~ 28076291 (-)
G113799 NA non-coding upstream 437027 28407406 ~ 28407839 (-)
G113823 NA non-coding upstream 670750 28641129 ~ 28641437 (-)
G113645 ptn,LOC106609498 other downstream 437619 27402600 ~ 27527348 (-)
G113530 NA other downstream 1464286 26500015 ~ 26500681 (-)
AMCG00006866 NA other downstream 4393834 23568155 ~ 23571133 (-)
G113050 NA other downstream 4557760 23404175 ~ 23407207 (-)
AMCG00006854 NA other downstream 5006661 22953176 ~ 22958306 (-)
G113775 LOC100846954 other upstream 296883 28267262 ~ 28292598 (-)
G113833 NA other upstream 740840 28711219 ~ 28812548 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000020_01548935_01559598 ITFG2 coding CI01000020 null 1548883 ~ 1559598 (-)