AMCG00006946


Basic Information

Item Value
gene id AMCG00006946
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 28368124 ~ 28401071 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006946
ATGTGCATAGGAAGCTCAACCAATCATATTGTCACATTTGATGGACTCGCCTTCAAGTTGAATGGTTTCTGCTCCTACACCTTAATGAAAGACTTCGGGCAAGACATTGAGATTGTACTTCACAGTGGGCAGTGTGAGGCATCGTCAAACCAAATCTGCATGAATTCCATGGAGGTGAAAAGGGCTGGTGTCTCTCTGGTGCTGCATGATGACATGGAGGTTACTCTCCAAGGGATAGAAACTCCAACTCCTATCAGCACAAGGGGCATGGAAGTTACTCAGTATGAAGGCATCATGCATAAAGTGTGGGTACAGAATCCGGGCTACGCTGTGACTTTCACACCTAGAAATAATGAATTCACCATTCAGCTGAGTCCAAAGGGGGTTTTCAACAAAACATCTGGACTTTGTGgtTACTGTGATCAGAATGAGCTGAATGACTTTGCTCTTAAAGATGGCTCAGTCACAGCAGACAGCAGTGTGTTCATTAAAGAGTGGACTCTACAGGAGCCTGGGGGTGTCACCTGTGAGCCCAGGGTCAGTGAGGTCTGCACTCACCAAGTCAATGACCAATGCCAGATCCTTCAGACATCTCTATTTGCCAAGTGCCATGCAGTGGTCCCCTTTGCACCCTTCATTGCACTGTGCCAGCAAAACAACTGTCACAGCATGGAAATCTGTGATATTGTGTCAGCTTACAGTCGGCTGTGCCGGCTACAAGGAATCTGTATCAACTGGCGATCTGCAGACTTCTGTGcCATGACATGCCCCAGTACAATGGTGTTTGATAGCTGCAGAACTGGCTGTATTGAGGATTGTGGTATCACCCAAAATGCTACATTATGCCTGGACACCCCCACTGAGGGCTGCTTTTGTCCTCCGGGCACTGCTTTCCACAATGAAACCTGTGTCAACAAAGACGTCTGCTTGCAGTGTGTGGATGAGAAGGGAGTGACTCATGAGATCTGTATGTGCTTAGACAACAGACAAATCAACTGCACCACAAGACCATGCTCCAACATTGAAGTGTGTGACATGGTAAACTGCGACCTTCCAGTCATGCCCAAATGTGAAGATGGACTCATTATCACCCTGAACAATCCTGGGCAGTGCAAGCCTATATATGAGTGTGCCTGTAAAAGAGACCAGTGTGCTCTGCAATCCAGGTCTCAGTGTCCTTCTCACCGGCGCCTCACTGTAAAGAAAACGCAGTGCTGTGATGTATATGAGTGCACCTGCAACTGCAACAACTCCACAATCATCTGCCCTCCAGGCTACATCACCAGTGCCCTGGTCAATGACTGTGGCTGCATTGACACCAAATGCATTCCTGACAAAGTTTGTGTGCACTCTGACGCAGTGTATCATGTCAGTAGTGAGTGGGAAGAGTCCTGCAAGTCCTGCAGATGCACAGACATGCAGGATAAAGTCACAGGGCTGCACATCGTTGAGTGCACTGAGAAAGGCTCTACATATTCAAAGGAACCGGGTGACTGCTGTGGGCAGTGTAAGAAATCCTCCTGTCTCGAAAAGGTTGCTGGAAGACCCATGGGCGATATGGATATTGGAGGCCGCTTACGCATGGTGGGGGAAAAGTGGACTTCTCCACAGAAGCCCTGTGTTGTCAATGAGTGCGTGCGGGTCAATGACGAGGTGTTCATAAGCCACTACAATGTGTCCTGCTCTCAGATGGACATACCAAAATGTCCACTCGGGACAGAACTCCAGTGCAATAATTTTGATGACTGCTGTCCCACATGTCAGTGTGGGGAAAATGTGATGGTTGACCTGTGCACTCATTGCGAATGCTCTTTGGAACAAGAATTGATGAAAAGAAGATATCGCCTGTCCTGCAGAAGAATTACCTGCACCCCATGTCCAGAGGCTAACGAAACCCGTAAAGATGGATGTACCTTACAttcctgcaaaataaataataaaggagaTTTAGTCCTGGAAACCAGAATAACCACCTGTCCTCCGCTGGATAAAGCCAAATGTCTTGCTGgtgCTGAACCAGAATGCAAGCAAACTGTTGGAGTTCTGAAGTACATTAAAATAGATGACTGCATGTCtgaaaatcaaattaacatCCAATATTGTGAGGGGAAGTGTACAAGCAAGTCTGTCTACTCTTTGGAAAAGAACCGTGTGGAaaagcagtgtgtgtgctgctcAGCTACAGCCACTGAAACCATGACAGTTCCTCTGAGGTGTGCTAACAGCACTGTACTGCAGCATGAAGTCCTCACTGTCAAGGCCTGTGACTGTCTGTCTCAGAACTGTGAAGGAGAGTGA

Function

GO:

id name namespace
GO:0035162 embryonic hemopoiesis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006946 True 2298 mRNA 0.47 14 28368124 28401071

Neighbor

gene id symbol gene type direction distance location
AMCG00006945 NA coding upstream 3514 28332468 ~ 28364610 (+)
AMCG00006947 NA coding upstream 36770 28293020 ~ 28331354 (+)
AMCG00006944 cwf19l1 coding upstream 179297 28147838 ~ 28188827 (+)
AMCG00006943 NA coding upstream 239989 28105608 ~ 28128135 (+)
AMCG00006942 NA coding upstream 432335 27914300 ~ 27935789 (+)
AMCG00006951 LOC105898343,LOC106910078,LOC106946326,LOC103151522,LOC107087059 coding downstream 92364 28493435 ~ 28494011 (+)
AMCG00006952 ano2,LOC104963823,LOC103369069 coding downstream 145250 28546321 ~ 28550460 (+)
AMCG00006953 NA coding downstream 225067 28626138 ~ 28626413 (+)
AMCG00006954 rad52,LOC107753587 coding downstream 448712 28849783 ~ 28855154 (+)
AMCG00006961 ninj2 coding downstream 716506 29117577 ~ 29121806 (+)
G113760 NA non-coding upstream 151889 28216000 ~ 28216235 (+)
G113747 NA non-coding upstream 164016 28200542 ~ 28204108 (+)
G113743 klhl42,LOC106576288,LOC106609448 non-coding upstream 225873 28141283 ~ 28142251 (+)
G113741 NA non-coding upstream 229186 28138351 ~ 28138938 (+)
G113717 LOC107575789 non-coding upstream 289665 28077953 ~ 28078459 (+)
G113805 LOC100846954 non-coding downstream 217935 28619006 ~ 28619812 (+)
G113824 NA non-coding downstream 246194 28647265 ~ 28647523 (+)
G113836 NA non-coding downstream 428588 28829659 ~ 28830065 (+)
G113846 NA non-coding downstream 467655 28868726 ~ 28868988 (+)
G113847 NA non-coding downstream 467988 28869059 ~ 28869326 (+)
G113400 NA other upstream 2535182 25815055 ~ 25832942 (+)
G113369 LOC108442871 other upstream 2749679 25618067 ~ 25618445 (+)
AMCG00006893 ndufa9,LOC107572617,LOC107686627,LOC107732787 other upstream 3781005 24509003 ~ 24587119 (+)
AMCG00006884 ccnd2a,ccnd2,LOC106573197,LOC106561356,LOC107575166,LOC107686624,LOC107732799 other upstream 4032208 24304696 ~ 24335916 (+)
AMCG00006878 ndufb2,LOC102790702 other upstream 4332012 24032089 ~ 24036112 (+)

Expression


Co-expression Network