AMCG00006949


Basic Information

Item Value
gene id AMCG00006949
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 28217613 ~ 28223587 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006949
GGGTGTACATTCTGATTGGTGCTGGCGCTCTCATGATGATTGTGGGGTTCTTGGGCTGCTGTGGTGCTATTCAGGAATCCCCCTGCATGCTTGGACTGttctttgttttcctgctcATCATATTTGCAGTTGAGATTGCTGCTGGAATATGGGGCTTTGCAAATCAGGACAAGGTTGTGAATGACATAGTGCAGTTCTACACCGAAACCTATACaacttatttaaaacacaaacaagaagcACTGAAGGAGACTCTACGGGCATTCCACTTTGGTCTGGATTGTTGTGGACTGACAGGTGTTATGGATGCACTTATCACCAAAGAAACCTGTCCTAAAAAAGAAGGACTTGAGGTTTTCAACACTTCTCCCTGCCCAGCAGCTATTCGTGAAGTGTTTGACTCTAAACTTCACATCATCGGTGGCGTTGGAATTGGCATTGGCGTTATC

Function

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K06460 CD9, TSPAN29; CD9 antigen

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006949 True 449 mRNA 0.45 5 28217613 28223587

Neighbor

gene id symbol gene type direction distance location
AMCG00006948 klhl42,LOC106609448,LOC106576288 coding downstream 73397 28141257 ~ 28144216 (-)
AMCG00006940 NA coding downstream 170537 28016663 ~ 28047076 (-)
AMCG00006941 NA coding downstream 202285 28002502 ~ 28015328 (-)
AMCG00006939 itfg2 coding downstream 247234 27964967 ~ 27970379 (-)
AMCG00006938 NA coding downstream 393539 27805483 ~ 27824074 (-)
AMCG00006955 NA coding upstream 526675 28750262 ~ 28811479 (-)
AMCG00006957 NA coding upstream 644315 28867902 ~ 28868926 (-)
AMCG00006956 NA coding upstream 656730 28880317 ~ 28892493 (-)
AMCG00006958 NA coding upstream 678754 28902341 ~ 28906211 (-)
AMCG00006959 wnk1b coding upstream 707443 28931030 ~ 28966524 (-)
G113724 NA non-coding downstream 141322 28059128 ~ 28076291 (-)
G113723 NA non-coding downstream 158682 28058719 ~ 28058931 (-)
G113722 NA non-coding downstream 159046 28058361 ~ 28058567 (-)
G113681 NA non-coding downstream 361152 27856111 ~ 27856461 (-)
G113673 NA non-coding downstream 412460 27802490 ~ 27805153 (-)
G113799 NA non-coding upstream 183819 28407406 ~ 28407839 (-)
G113823 NA non-coding upstream 417542 28641129 ~ 28641437 (-)
G113876 NA non-coding upstream 640292 28863879 ~ 28867820 (-)
G113905 NA non-coding upstream 848594 29072181 ~ 29074799 (-)
G113645 ptn,LOC106609498 other downstream 690265 27402600 ~ 27527348 (-)
G113530 NA other downstream 1716932 26500015 ~ 26500681 (-)
AMCG00006866 NA other downstream 4646480 23568155 ~ 23571133 (-)
G113050 NA other downstream 4810406 23404175 ~ 23407207 (-)
AMCG00006854 NA other downstream 5259307 22953176 ~ 22958306 (-)
G113775 LOC100846954 other upstream 43675 28267262 ~ 28292598 (-)
G113833 NA other upstream 487632 28711219 ~ 28812548 (-)

Expression


Co-expression Network