AMCG00006956


Basic Information

Item Value
gene id AMCG00006956
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 28880317 ~ 28892493 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006956
CACCTCACAACATTGGCCTCTCTCACTCGGCCTCCTCAGTGAGTCTTCAGCAGGCCTTTGCTGAGATGCGGCAGGCCCAGTATGAGGAGGGCCCCAGTACTGCTCCGCCCATGGTCAACCTCTCTATGGCCCCCTTACTGCCCACCCTATTAACCGGACTCATCCCAGAGACCACTGTGACTGTGACCGCCCCTTCCAGCGGCTCTGTCACCTCTCCCCCATTAACTCAGTGTCTGAGCAGCGTCCCCGAGGCCAGCACTGCCTCCCTGCCTGCTGTCTCCCTGCCTGCTGTCTCCCTCCCCAGCTCATCCTCGCCGCCGCCTAGCACCCAGCCACCGCAGTCCGCTCCAGCGCTGAGTCTGGTGGGGAACGCTGGGGCTGTACCTCCCCCATCTCAGCCTGGCCCTCTGTCTCCACCTGCCCACTCATCCCAGCCTGTCCCGCTTAGTGCAGCCGCTCCCAGCATCAGCGCCCCAGCTTCCGTAACGCTGCCTGTTCTCGCCCAGCTGCATACAATTGCACCGGTCACCACTCTGCCAACCTCTGCCACCTTTCCCATGACCTCAGTGCAGCAGGTACTCACTGGGACAGTGCCCAGCAGTATAGTCCCCTCAGCTTCCGGACCTTTGATTATCAGCAACAGCACCGAGCCCCCAGCTCCGCTTCATCCGGACAGCTCtgcctctgctgctgctgctctgactTCTGCTACGCAGACTGTCACCCAGTCACAGTCCACCTCTGTGGTAGGGGGCGTGTCCTTACTCCCCCAACTGCCCCTCCCTAACCTGCAACCTGTGACCACTAACATCCCAGTGGTGCAGCAGACCCTAGTTCACACCCAGCCCCAGCCGACCCCCTTCCCCAACCAGCCCCACACCCACTGCCTGGAGTGTGAGGGCGACCCGCAGGGCAAGGCTCCCGGCATCGATGACATCAAGACCCTGGATAAAAAGCTGCGCTCTTTGTTCAGCGAGCACGTTCCCAGCATGTCCTCTGCTCAGCATGAAGCTGCGGACTCTGCAGGGACCCCCAGTATGCCTGGAACCTCAGCCCCTACAGGTACCTCATCCACGACCACAACTGCTGCCCCCACACCGCCGACCAGCCTGCCCCTGGGAGTTACTGGGCAGACCACGTCCACCCCAGCTTCCACGCCTGGGCAAGCTGGTACCCCTGCCAACTATGGGCAGACCCCCACTTCCAGCACACAGGCTCTGGGAAAAGCGGGTACACCCTCATCCAAGCCCCCCCTGGGAAGAGTACCCGTGTTGCCTGTAGGCACAGAAATGCAGGCTGGCACTCCACCCACTGAACATCTGCCACCCTTTCCAGGACCTTCTTTAACCCAGtcTCAGCAGCCTTTGGAAGACCTGGATGCCCAGTTAAGACGGGCCCTGAGCCCAGAGACAGTCTTGGTTAATACTGCACAGTCTTCAGTGACCTCACCTCCTTCAAGTGTTGGAGACCAGAGTTATCTGGCTGGGCAGCTTCTCCCTATAGGCTCTGCAGCTGTAGAAGTCGACTCGGGCACCGCTCTCGCAGCAGGTGTTATCAAGCTAGGAAGATTCCAGGTGTCCATGACTTCCGATGAAGCTGTGTTAAGGAAAGAAAGCCAAGCTGTGTCCAGCTCCATGGAATCCAATTCATCTTCCACCTCCAAATCCtcgtcctcttcctcttcctcgtcctcctccACCCTGTCTAGCCCTGAGCACACGCTGCATAAGTCCACCAAACAGTATCGCGGTCACCCGCAGGATGTGGTGGATGGCTTGCCTCCTCTTCCCCACCGAACTGAGCCCGGGACTGAAGCTGGGGCAGCGCAGCCCACCACCATCGGCCGATTCCAGGTGACCACCCGCGCGGACACCAAGGTCGGACGCTTCTCTGTGAGCCGAGCCCAGGATGAGATGGCAGCCCCCATGGCGGACCCTGAGGCCCCAAGCGGAGAAGGCATGGCAGAGCAGCACAGCCAGCGCAACGGGCCCTCCCAGAGCACCGACGGAGACGCCAGTCCCCTCTCCAAGAGCTCCCTGCAGCTGCCCAGCCTGCACAACTCCTTCAACTCCTACGTCAGCAGTGACAACGACTCAGAGTTTGAGGACGAGGACCTTAAGCAGGAGCTTCACCGACTGCGGCAGAAGCACATGAAAGAGATTCAGGCTCTGCAGGCACGGCAGAAGCAGGAGATCGAAAGTCTGTACGCAAAGCTGGGGAAAGCCCTCCCATCTGTGATCATGCCTCCTGTGGCACCCCTGCctgggcggcggcggcggcccaACAAGGGGAAGGGCAGCAAGTCCAGTAGAAACAGTTCACAGGGCAGCAAGAGCCCCCTGCAGCCAGGCACTTTATCAGCTCAGAGTGCACCGTCAGTGTACCCAGCACAGCAGACTCTGCTGGGCCCTGGGGGTGTCACCGAACCTGGGCAGAGTCCCCTCCTGCAGCCCCTGAAGCCCTCTCCCTCCAGTGAGAACCTGTGCTCGGCCTACACGAGTGACGCTGCACTGTCTGTGCCAAGCCTCTCCGCACCTGCGCAAGGCTGCGTAAAGTTCAGCTGTGTGTCGGAGCGAGTGACCATCAAACCAGGTGGCAGAAGGACCCGATTTCTGAGTACGCCCTGCTTGGCTCTTTGTGTG

Function

GO: NA

KEGG:

id description
ko04120 Ubiquitin mediated proteolysis

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006956 True 2642 mRNA 0.61 9 28880317 28892493

Neighbor

gene id symbol gene type direction distance location
AMCG00006957 NA coding downstream 11391 28867902 ~ 28868926 (-)
AMCG00006955 NA coding downstream 68838 28750262 ~ 28811479 (-)
AMCG00006949 NA coding downstream 656730 28217613 ~ 28223587 (-)
AMCG00006948 klhl42,LOC106609448,LOC106576288 coding downstream 736101 28141257 ~ 28144216 (-)
AMCG00006940 NA coding downstream 833241 28016663 ~ 28047076 (-)
AMCG00006958 NA coding upstream 9848 28902341 ~ 28906211 (-)
AMCG00006959 wnk1b coding upstream 38537 28931030 ~ 28966524 (-)
AMCG00006960 NA coding upstream 134919 29027412 ~ 29032897 (-)
AMCG00006967 NA coding upstream 276070 29168563 ~ 29257106 (-)
G113876 NA non-coding downstream 12497 28863879 ~ 28867820 (-)
G113823 NA non-coding downstream 238880 28641129 ~ 28641437 (-)
G113799 NA non-coding downstream 472478 28407406 ~ 28407839 (-)
G113724 NA non-coding downstream 804026 28059128 ~ 28076291 (-)
G113723 NA non-coding downstream 821386 28058719 ~ 28058931 (-)
G113905 NA non-coding upstream 179688 29072181 ~ 29074799 (-)
G113833 NA other downstream 67769 28711219 ~ 28812548 (-)
G113775 LOC100846954 other downstream 587719 28267262 ~ 28292598 (-)
G113645 ptn,LOC106609498 other downstream 1352969 27402600 ~ 27527348 (-)
G113530 NA other downstream 2379636 26500015 ~ 26500681 (-)
AMCG00006866 NA other downstream 5309184 23568155 ~ 23571133 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location