AMCG00006963 (prr5,LOC100286559,LOC101171242)


Basic Information

Item Value
gene id AMCG00006963
gene name prr5,LOC100286559,LOC101171242
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 29174902 ~ 29177235 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006963
atGAGGACTCTCCATAGGTTGAAGTTAATGAGTTCCCCGAGCCTTAGCGAACTGGGCAAGAGTGAGAAGGCAGCGCTAGATGAGAGGGGGACCCAGCAGAGACGGGCAGGGGCCAACGCTACATGGAACAGCATCCACAATGCAGTGATTGCAGTTTTCCAGAAGAAGGGGCTTGCAGACAATGAGCTTTATTCCTTGAACGAGGGGGTGAGGTGA

Function

symbol description
prr5 Predicted to be involved in TORC2 signaling. Predicted to act upstream of or within positive regulation of phosphatidylinositol 3-kinase signaling and positive regulation of protein phosphorylation. Part of TORC2 complex.

NR:

description
Proline-rich protein 5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006963 True 216 mRNA 0.53 2 29174902 29177235

Neighbor

gene id symbol gene type direction distance location
AMCG00006961 ninj2 coding upstream 53096 29117577 ~ 29121806 (+)
AMCG00006954 rad52,LOC107753587 coding upstream 319748 28849783 ~ 28855154 (+)
AMCG00006953 NA coding upstream 548489 28626138 ~ 28626413 (+)
AMCG00006952 ano2,LOC104963823,LOC103369069 coding upstream 624442 28546321 ~ 28550460 (+)
AMCG00006951 LOC105898343,LOC106910078,LOC106946326,LOC103151522,LOC107087059 coding upstream 680891 28493435 ~ 28494011 (+)
AMCG00006962 NA coding downstream 32958 29210193 ~ 29214986 (+)
AMCG00006966 NA coding downstream 56411 29233646 ~ 29235193 (+)
AMCG00006964 NA coding downstream 58013 29235248 ~ 29238470 (+)
AMCG00006965 NA coding downstream 63281 29240516 ~ 29248059 (+)
G113894 NA non-coding upstream 103719 29070819 ~ 29071183 (+)
G113847 NA non-coding upstream 305576 28869059 ~ 28869326 (+)
G113846 NA non-coding upstream 305914 28868726 ~ 28868988 (+)
G113836 NA non-coding upstream 344837 28829659 ~ 28830065 (+)
G113824 NA non-coding upstream 527379 28647265 ~ 28647523 (+)
G113925 NA non-coding downstream 59968 29237203 ~ 29240687 (+)
G113955 NA non-coding downstream 148808 29326043 ~ 29326264 (+)
G113400 NA other upstream 3341960 25815055 ~ 25832942 (+)
G113369 LOC108442871 other upstream 3556457 25618067 ~ 25618445 (+)
AMCG00006893 ndufa9,LOC107572617,LOC107686627,LOC107732787 other upstream 4587783 24509003 ~ 24587119 (+)
AMCG00006884 ccnd2a,ccnd2,LOC106573197,LOC106561356,LOC107575166,LOC107686624,LOC107732799 other upstream 4838986 24304696 ~ 24335916 (+)
AMCG00006878 ndufb2,LOC102790702 other upstream 5138790 24032089 ~ 24036112 (+)

Expression


Co-expression Network