G108256


Basic Information

Item Value
gene id G108256
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 384397 ~ 405340 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU135359
AGGCGGACAGACACGCACCGGCACCGGCGCCGACTCACCCGGACCGAGCGACGTCTGCGGCCGGGAGCCCCCTGATCCGCGCCGATTCTCACGGAAAAAAGATTTCCGGCCACTAAACATcgattattaatattgtaatcgTTATTCTGAAAGCCTGGTCGGGTCACATGGTGCGGTGGGCCAATGGGGAGGACTGCGTGACGTCACGGGCACAAACGGCGCGGTTCTGCGGGAAGCGGCGGACGCGTCTCGGTTCGTGTCTGCGACGCTTATATTCCGGATGGATCCGGCCGGGAGAGCGAGGCGCGCCCGGGAGACGCCGGGGCCGGGGAGCGCTGTCGTGCCTGGTCATGTGactgctcttcctctctcccctcctcttcctccctcggCCCAGAGCCGGCGGACATGTTGGATGGAAAGAGcatggaacaaaaaaaagaaggaaagaaagaaactcCCAGCCTGGCGGAGGACAGCGGCTTAAAGAGCGGATTAACACACGGACTGCGCAAACCACGGCGCCGCGGAGGGACACTGAGGAGACGGacgttttcttttcttttgacatTTTGGAAACGAGTAGTTGTGATGTCGGTGATTTAAACGCacggttgtgtgtgtggggtgttGTGTTGTGGGGTtgtgttgtgt

Function

NR:

description
PREDICTED: heat shock cognate 71 kDa protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135359 True 654 lncRNA 0.59 2 384397 405340

Neighbor

gene id symbol gene type direction distance location
AMCG00006224 NA coding upstream 47117 320671 ~ 337280 (+)
AMCG00006225 NA coding upstream 81812 299339 ~ 302585 (+)
AMCG00006226 NA coding upstream 88000 283664 ~ 296397 (+)
AMCG00006223 psb8,LOC107694197,LOC107574275,LOC105888923,LOC105903056 coding upstream 106308 274192 ~ 278089 (+)
AMCG00006215 NA coding upstream 112750 266634 ~ 271647 (+)
AMCG00006235 NA coding downstream 85365 490705 ~ 491797 (+)
AMCG00006233 NA coding downstream 142486 547826 ~ 562265 (+)
AMCG00006234 NA coding downstream 164064 569404 ~ 576257 (+)
AMCG00006237 NA coding downstream 205127 610467 ~ 633814 (+)
AMCG00006252 NA coding downstream 483738 889078 ~ 895444 (+)
G108248 NA non-coding upstream 70984 311554 ~ 313413 (+)
G108239 NA non-coding upstream 119841 263429 ~ 264556 (+)
G108193 NA non-coding upstream 209195 132006 ~ 175202 (+)
G108219 NA non-coding upstream 218241 163478 ~ 166156 (+)
G108182 NA non-coding upstream 340484 17651 ~ 43913 (+)
G108263 NA non-coding downstream 30061 435401 ~ 435621 (+)
G108312 NA non-coding downstream 302717 708057 ~ 708928 (+)
G108314 LOC106569953 non-coding downstream 322537 727877 ~ 730186 (+)
G108318 NA non-coding downstream 368319 773659 ~ 774039 (+)
G108308 NA non-coding downstream 376685 782025 ~ 782475 (+)
AMCG00006218 NA other upstream 159044 219104 ~ 225353 (+)
AMCG00006205 NA other upstream 202901 175725 ~ 181496 (+)
AMCG00006208 NA other upstream 243739 133988 ~ 140658 (+)
AMCG00006231 NA other downstream 21636 426976 ~ 433905 (+)
AMCG00006236 NA other downstream 239378 644718 ~ 652140 (+)
G108319 NA other downstream 369469 774809 ~ 791062 (+)
AMCG00006246 slc39a7,LOC107395789,LOC106588393 other downstream 441221 846561 ~ 855720 (+)
AMCG00006256 NA other downstream 580533 985873 ~ 1003871 (+)

Expression


Co-expression Network