G108263


Basic Information

Item Value
gene id G108263
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 435401 ~ 435621 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU135368
CTGAAGGAGGTGTTAGGCTACTTAATGTGTCATTAGTGTATTCAGTGCTAAACTGATACCAGTTACTGTTCAAACATCTTCGCTTGGTTCCAAACACAGTGTAAGGGTGGGCATCTAACTCTGCTGGAGTGGGACGCTCTCTCATATATTCATCTCCTGCCAGTCGAGCTTTTGGCAAGATTAAACTGGTCTctgtttctaaataaaaaatacatttaaaa

Function

GO: NA

KEGG:

id description
ko04064 NF-kappa B signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU135368 True 221 lncRNA 0.40 1 435401 435621

Neighbor

gene id symbol gene type direction distance location
AMCG00006224 NA coding upstream 98121 320671 ~ 337280 (+)
AMCG00006225 NA coding upstream 132816 299339 ~ 302585 (+)
AMCG00006226 NA coding upstream 139004 283664 ~ 296397 (+)
AMCG00006223 psb8,LOC107694197,LOC107574275,LOC105888923,LOC105903056 coding upstream 157312 274192 ~ 278089 (+)
AMCG00006215 NA coding upstream 163754 266634 ~ 271647 (+)
AMCG00006235 NA coding downstream 55084 490705 ~ 491797 (+)
AMCG00006233 NA coding downstream 112205 547826 ~ 562265 (+)
AMCG00006234 NA coding downstream 133783 569404 ~ 576257 (+)
AMCG00006237 NA coding downstream 174846 610467 ~ 633814 (+)
AMCG00006252 NA coding downstream 453457 889078 ~ 895444 (+)
G108256 NA non-coding upstream 30061 384397 ~ 405340 (+)
G108252 NA non-coding upstream 30137 397163 ~ 405264 (+)
G108253 NA non-coding upstream 42608 374136 ~ 392793 (+)
G108248 NA non-coding upstream 121988 311554 ~ 313413 (+)
G108239 NA non-coding upstream 170845 263429 ~ 264556 (+)
G108312 NA non-coding downstream 272436 708057 ~ 708928 (+)
G108314 LOC106569953 non-coding downstream 292256 727877 ~ 730186 (+)
G108318 NA non-coding downstream 338038 773659 ~ 774039 (+)
G108308 NA non-coding downstream 346404 782025 ~ 782475 (+)
G108322 NA non-coding downstream 354355 789976 ~ 790833 (+)
AMCG00006231 NA other upstream 1496 426976 ~ 433905 (+)
AMCG00006218 NA other upstream 210048 219104 ~ 225353 (+)
AMCG00006205 NA other upstream 253905 175725 ~ 181496 (+)
AMCG00006208 NA other upstream 294743 133988 ~ 140658 (+)
AMCG00006236 NA other downstream 209097 644718 ~ 652140 (+)
G108319 NA other downstream 339188 774809 ~ 791062 (+)
AMCG00006246 slc39a7,LOC107395789,LOC106588393 other downstream 410940 846561 ~ 855720 (+)
AMCG00006256 NA other downstream 550252 985873 ~ 1003871 (+)
AMCG00006276 NA other downstream 842839 1278460 ~ 1286052 (+)

Expression


Co-expression Network