G108308


Basic Information

Item Value
gene id G108308
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 782025 ~ 782475 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU135422
tcagtcagtcagtattaatgtgctgtagtgtccagtcagtcagtgttaatgtgctgtagtgtccagtcagtcagtcagtgttaatgtgctgtagtgtccagtcagtcagtgttaatgtgctgtagtgtccagtcagtcagtcagtgttaatgtactgtagtgtccagtcagtcagtcagtgttaatgtgctgtagtgtccagtcagtcagacagtgttaatgtgctgcagTGTCCAGTCCCCCCTCACCTTCTCTCTTCATGCCCATGGCAAGACACTTCTGGTAGCGGCAATACTGGCAGCGGTTCCTCTGCCGCTTGTCCACCAGGCAGTCCTTGTTGTCCCTGCAGGTGTAGCTCAGGTCCTTCCTCACCGTGCGCTTGAAGAAGCCCTTACAGCCCTCACAGCTGTACACCCCGTAGTGCttcc

Function

GO: NA

KEGG:

id description
ko04514 Cell adhesion molecules

RNA

RNA id representative length rna type GC content exon number start site end site
TU135422 True 428 lncRNA 0.51 2 782025 782475

Neighbor

gene id symbol gene type direction distance location
AMCG00006237 NA coding upstream 148211 610467 ~ 633814 (+)
AMCG00006234 NA coding upstream 205768 569404 ~ 576257 (+)
AMCG00006233 NA coding upstream 219760 547826 ~ 562265 (+)
AMCG00006235 NA coding upstream 290228 490705 ~ 491797 (+)
AMCG00006224 NA coding upstream 444745 320671 ~ 337280 (+)
AMCG00006252 NA coding downstream 106603 889078 ~ 895444 (+)
AMCG00006250 vps52 coding downstream 114503 896978 ~ 908806 (+)
AMCG00006251 NA coding downstream 142139 924614 ~ 929086 (+)
AMCG00006249 LOC106588375 coding downstream 149684 932159 ~ 946648 (+)
AMCG00006253 NA coding downstream 168447 950922 ~ 959903 (+)
G108318 NA non-coding upstream 7986 773659 ~ 774039 (+)
G108314 LOC106569953 non-coding upstream 51839 727877 ~ 730186 (+)
G108312 NA non-coding upstream 73097 708057 ~ 708928 (+)
G108263 NA non-coding upstream 346404 435401 ~ 435621 (+)
G108256 NA non-coding upstream 376685 384397 ~ 405340 (+)
G108322 NA non-coding downstream 7501 789976 ~ 790833 (+)
G108496 NA non-coding downstream 151040 933515 ~ 933825 (+)
G108513 NA non-coding downstream 284561 1067036 ~ 1067725 (+)
G108515 NA non-coding downstream 287852 1070327 ~ 1070771 (+)
G108516 NA non-coding downstream 288819 1071294 ~ 1071772 (+)
AMCG00006236 NA other upstream 129885 644718 ~ 652140 (+)
AMCG00006231 NA other upstream 348120 426976 ~ 433905 (+)
AMCG00006218 NA other upstream 556672 219104 ~ 225353 (+)
AMCG00006205 NA other upstream 600529 175725 ~ 181496 (+)
AMCG00006208 NA other upstream 641367 133988 ~ 140658 (+)
AMCG00006246 slc39a7,LOC107395789,LOC106588393 other downstream 64086 846561 ~ 855720 (+)
AMCG00006256 NA other downstream 203398 985873 ~ 1003871 (+)
AMCG00006276 NA other downstream 495985 1278460 ~ 1286052 (+)
AMCG00006275 NA other downstream 504354 1286829 ~ 1315558 (+)
G108585 NA other downstream 567908 1350383 ~ 1429987 (+)

Expression


Co-expression Network