G108314 (LOC106569953)


Basic Information

Item Value
gene id G108314
gene name LOC106569953
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 727877 ~ 730186 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU135429
CTGACGTTCCCTTGGCTCCTGGTTTCCCTGTAGCTCCTCGGGGGCCTCTCTGACCTCTGGGACCcgTGGGGCCTCTCTGTCCTCTGGGCCCAGACTTGCCAATCAAaccCCTCGCTCCCTTCTCGCCATTTGTACCGGGGAATCCTGGGAAACCGAGGGAtccCTTGGGTCCTTGTCTTCCAGGATATCCAGGCAGTCCAGGAACACCCAGTTTACCCT

Function

NR:

description
PREDICTED: collagen alpha-1(V) chain-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135429 True 219 lncRNA 0.60 5 727877 730186

Neighbor

gene id symbol gene type direction distance location
AMCG00006237 NA coding upstream 94063 610467 ~ 633814 (+)
AMCG00006234 NA coding upstream 151620 569404 ~ 576257 (+)
AMCG00006233 NA coding upstream 165612 547826 ~ 562265 (+)
AMCG00006235 NA coding upstream 236080 490705 ~ 491797 (+)
AMCG00006224 NA coding upstream 390597 320671 ~ 337280 (+)
AMCG00006252 NA coding downstream 158892 889078 ~ 895444 (+)
AMCG00006250 vps52 coding downstream 166792 896978 ~ 908806 (+)
AMCG00006251 NA coding downstream 194428 924614 ~ 929086 (+)
AMCG00006249 LOC106588375 coding downstream 201973 932159 ~ 946648 (+)
AMCG00006253 NA coding downstream 220736 950922 ~ 959903 (+)
G108312 NA non-coding upstream 18949 708057 ~ 708928 (+)
G108263 NA non-coding upstream 292256 435401 ~ 435621 (+)
G108256 NA non-coding upstream 322537 384397 ~ 405340 (+)
G108252 NA non-coding upstream 322613 397163 ~ 405264 (+)
G108253 NA non-coding upstream 335084 374136 ~ 392793 (+)
G108318 NA non-coding downstream 43473 773659 ~ 774039 (+)
G108308 NA non-coding downstream 51839 782025 ~ 782475 (+)
G108322 NA non-coding downstream 59790 789976 ~ 790833 (+)
G108496 NA non-coding downstream 203329 933515 ~ 933825 (+)
G108513 NA non-coding downstream 336850 1067036 ~ 1067725 (+)
AMCG00006236 NA other upstream 75737 644718 ~ 652140 (+)
AMCG00006231 NA other upstream 293972 426976 ~ 433905 (+)
AMCG00006218 NA other upstream 502524 219104 ~ 225353 (+)
AMCG00006205 NA other upstream 546381 175725 ~ 181496 (+)
AMCG00006208 NA other upstream 587219 133988 ~ 140658 (+)
G108319 NA other downstream 44623 774809 ~ 791062 (+)
AMCG00006246 slc39a7,LOC107395789,LOC106588393 other downstream 116375 846561 ~ 855720 (+)
AMCG00006256 NA other downstream 255687 985873 ~ 1003871 (+)
AMCG00006276 NA other downstream 548274 1278460 ~ 1286052 (+)
AMCG00006275 NA other downstream 556643 1286829 ~ 1315558 (+)

Expression


Co-expression Network