G108329


Basic Information

Item Value
gene id G108329
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 33213 ~ 39349 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU135461
GTGGAGGACACTGATACAcaatacactgtacacacagtaTAGAAACGAGAAGGACAGACaggcacaaacaaacacacagacagatacacgtacacacagacacaaacatagaGTCAAactgacagacatacagacagacacagacggTACCTGTTAAAGTCGCTCGCTTCCTCCAGCGTCCGTCCGTCGGTGGAACTAACTGACAAACCCGACATCAAACTCTCGctctctatctttctatctctctatctctctatctaccGCTCTAACTTATCTGTCTATATCTGACACATCGTGTCTGCGTCCgtgtgtccgtctgtgtgtcagtgtgtcagtcagtcaagcCGTCAGTGTCACAGTACCAGTATtgctgtgcctctctctctctctctctctctctgcgtgtcagtctgtctgtaaatcagtcctgtcctctctctctgagtgtctgtctgtctgtctgtctgtcagtcctgtcctctctctgcGCGTTGTCGTACAGGCGCGTTTAAAGATCCGCCTTGCAGGAGTCCGCCGGAGACGCCATCGCCTCTCTCTCGACTTGTTGTGACGCAGAGATAAAACGGAGACGGAGAAGTGAactgaaatgagagagagagagagagagagagagaNNNNNNNNNNNNNNgagagagagagagaggaagaaagggagacagaatttaatttaattgtatgatGGTTTCCCTgctatatatgcacacacatatcttgtttcctttctatttcaatatttcactgctttggcaacactgatgaCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135461 True 782 lncRNA 0.47 2 33213 39349

Neighbor

gene id symbol gene type direction distance location
AMCG00006211 LOC102301914 coding upstream 30970 70319 ~ 89489 (-)
AMCG00006212 NA coding upstream 60553 99902 ~ 108542 (-)
AMCG00006209 NA coding upstream 102723 142072 ~ 146398 (-)
AMCG00006210 NA coding upstream 108022 147371 ~ 150061 (-)
AMCG00006213 NA coding upstream 124253 163602 ~ 165518 (-)
G108323 NA non-coding downstream 11863 17554 ~ 21350 (-)
G108349 NA non-coding upstream 77788 117137 ~ 118399 (-)
G108330 NA non-coding upstream 101210 140559 ~ 175193 (-)
G108365 NA non-coding upstream 231407 270756 ~ 278261 (-)
G108366 NA non-coding upstream 325929 365278 ~ 368624 (-)
G108397 NA non-coding upstream 396052 435401 ~ 435621 (-)
G108324 NA other upstream 46140 85489 ~ 225141 (-)
G108379 NA other upstream 294439 333788 ~ 343011 (-)
AMCG00006232 LOC107694105,LOC107737194,LOC107751684,LOC107575376 other upstream 354483 393832 ~ 397899 (-)
AMCG00006241 NA other upstream 440233 479582 ~ 562415 (-)
AMCG00006243 NA other upstream 661186 700535 ~ 701940 (-)

Expression


Co-expression Network