Gene
RNA
| Item | Value |
|---|---|
| gene id | G108397 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 435401 ~ 435621 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| ko04064 | NF-kappa B signaling pathway |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU135552 | True | 221 | lncRNA | 0.40 | 1 | 435401 | 435621 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00006230 | NA | coding | downstream | 83087 | 344775 ~ 352314 (-) |
| AMCG00006227 | NA | coding | downstream | 114313 | 311224 ~ 321088 (-) |
| AMCG00006228 | NA | coding | downstream | 136264 | 296206 ~ 299137 (-) |
| AMCG00006229 | NA | coding | downstream | 144716 | 287691 ~ 290685 (-) |
| AMCG00006221 | NA | coding | downstream | 168520 | 263637 ~ 266881 (-) |
| AMCG00006238 | NA | coding | upstream | 72548 | 508169 ~ 511193 (-) |
| AMCG00006240 | NA | coding | upstream | 103578 | 539199 ~ 539936 (-) |
| AMCG00006242 | NA | coding | upstream | 229965 | 665586 ~ 675760 (-) |
| AMCG00006239 | NA | coding | upstream | 240963 | 676584 ~ 686559 (-) |
| AMCG00006244 | NA | coding | upstream | 276211 | 711832 ~ 720393 (-) |
| G108366 | NA | non-coding | downstream | 66777 | 365278 ~ 368624 (-) |
| G108365 | NA | non-coding | downstream | 157140 | 270756 ~ 278261 (-) |
| G108330 | NA | non-coding | downstream | 260208 | 140559 ~ 175193 (-) |
| G108349 | NA | non-coding | downstream | 317002 | 117137 ~ 118399 (-) |
| G108329 | NA | non-coding | downstream | 396052 | 33213 ~ 39349 (-) |
| G108427 | NA | non-coding | upstream | 149921 | 585542 ~ 712764 (-) |
| G108451 | NA | non-coding | upstream | 335490 | 771111 ~ 771337 (-) |
| G108461 | NA | non-coding | upstream | 376114 | 811735 ~ 811963 (-) |
| G108478 | NA | non-coding | upstream | 416663 | 852284 ~ 855672 (-) |
| G108480 | NA | non-coding | upstream | 422173 | 857794 ~ 858315 (-) |
| AMCG00006232 | LOC107694105,LOC107737194,LOC107751684,LOC107575376 | other | downstream | 37502 | 393832 ~ 397899 (-) |
| G108379 | NA | other | downstream | 92390 | 333788 ~ 343011 (-) |
| G108324 | NA | other | downstream | 210260 | 85489 ~ 225141 (-) |
| AMCG00006241 | NA | other | upstream | 43961 | 479582 ~ 562415 (-) |
| AMCG00006243 | NA | other | upstream | 264914 | 700535 ~ 701940 (-) |
| AMCG00006245 | LOC106569953,LOC106588396,LOC107101422,LOC107103722 | other | upstream | 290443 | 726064 ~ 748736 (-) |
| AMCG00006247 | NA | other | upstream | 403234 | 838855 ~ 874494 (-) |
| G108708 | NA | other | upstream | 690941 | 1126562 ~ 1134690 (-) |
