G108451


Basic Information

Item Value
gene id G108451
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 771111 ~ 771337 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU135635
cttaacctcctttctctccccctgcaATGTCCAGCCAGTCATtccttctctctgtccttccctttctctctctctctctctctccctctctttctcaaaGACCCCTCTGTTCTCTGCACATTCCTTGgttctcccctccccccattcTCACCAGACCTGTGGTACCTCCCATTTCCTTCCCCACCACCCACAGAACAGTGTCCCAATGGTTCAGTCCACAGATTCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135635 True 227 lncRNA 0.53 1 771111 771337

Neighbor

gene id symbol gene type direction distance location
AMCG00006244 NA coding downstream 50718 711832 ~ 720393 (-)
AMCG00006239 NA coding downstream 84552 676584 ~ 686559 (-)
AMCG00006242 NA coding downstream 95351 665586 ~ 675760 (-)
AMCG00006240 NA coding downstream 231175 539199 ~ 539936 (-)
AMCG00006238 NA coding downstream 259918 508169 ~ 511193 (-)
AMCG00006248 rxrba,rxrb,LOC107729870,LOC107566635,LOC107751683 coding upstream 3137 774474 ~ 785585 (-)
AMCG00006255 NA coding upstream 125641 896978 ~ 900845 (-)
AMCG00006259 NA coding upstream 271525 1042862 ~ 1047510 (-)
AMCG00006260 NA coding upstream 276841 1048178 ~ 1049728 (-)
AMCG00006258 psb7,LOC106569939,LOC106588382 coding upstream 296717 1068054 ~ 1073294 (-)
G108427 NA non-coding downstream 58347 585542 ~ 712764 (-)
G108397 NA non-coding downstream 335490 435401 ~ 435621 (-)
G108366 NA non-coding downstream 402487 365278 ~ 368624 (-)
G108365 NA non-coding downstream 492850 270756 ~ 278261 (-)
G108330 NA non-coding downstream 595918 140559 ~ 175193 (-)
G108461 NA non-coding upstream 40398 811735 ~ 811963 (-)
G108478 NA non-coding upstream 80947 852284 ~ 855672 (-)
G108480 NA non-coding upstream 86457 857794 ~ 858315 (-)
G108484 NA non-coding upstream 117736 889073 ~ 889802 (-)
G108491 NA non-coding upstream 136553 907890 ~ 909028 (-)
AMCG00006245 LOC106569953,LOC106588396,LOC107101422,LOC107103722 other downstream 22375 726064 ~ 748736 (-)
AMCG00006243 NA other downstream 69171 700535 ~ 701940 (-)
AMCG00006241 NA other downstream 208696 479582 ~ 562415 (-)
AMCG00006232 LOC107694105,LOC107737194,LOC107751684,LOC107575376 other downstream 373212 393832 ~ 397899 (-)
G108379 NA other downstream 428100 333788 ~ 343011 (-)
AMCG00006247 NA other upstream 67518 838855 ~ 874494 (-)
G108708 NA other upstream 355225 1126562 ~ 1134690 (-)
AMCG00006266 NA other upstream 363564 1134901 ~ 1137952 (-)
AMCG00006274 zbtb12,LOC106570057,LOC106588515 other upstream 439949 1211286 ~ 1216184 (-)
AMCG00006277 prrt1,LOC108272790,LOC107694357 other upstream 565850 1337187 ~ 1341665 (-)

Expression


Co-expression Network