G108496


Basic Information

Item Value
gene id G108496
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 933515 ~ 933825 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU135710
ctgactgactgactggacactacagcacattaacactgactgactgactgactggacactacagcacattaacactgactgactgactggacactacagcacattaacactgactgactgaacactacaggacattaacactgactgactggacactacagtacattaacactgactgactgactggacactacagcacattaacactgactgactggacactacagcacattaacactgactggacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135710 True 249 lncRNA 0.45 2 933515 933825

Neighbor

gene id symbol gene type direction distance location
AMCG00006251 NA coding upstream 4429 924614 ~ 929086 (+)
AMCG00006250 vps52 coding upstream 24709 896978 ~ 908806 (+)
AMCG00006252 NA coding upstream 38071 889078 ~ 895444 (+)
AMCG00006237 NA coding upstream 299701 610467 ~ 633814 (+)
AMCG00006234 NA coding upstream 357258 569404 ~ 576257 (+)
AMCG00006253 NA coding downstream 17097 950922 ~ 959903 (+)
AMCG00006254 NA coding downstream 40833 974658 ~ 982685 (+)
AMCG00006257 NA coding downstream 92378 1026203 ~ 1039280 (+)
AMCG00006261 NA coding downstream 143468 1077293 ~ 1085987 (+)
AMCG00006262 NA coding downstream 155766 1089591 ~ 1098771 (+)
G108322 NA non-coding upstream 142682 789976 ~ 790833 (+)
G108308 NA non-coding upstream 151040 782025 ~ 782475 (+)
G108318 NA non-coding upstream 159476 773659 ~ 774039 (+)
G108314 LOC106569953 non-coding upstream 203329 727877 ~ 730186 (+)
G108312 NA non-coding upstream 224587 708057 ~ 708928 (+)
G108513 NA non-coding downstream 133211 1067036 ~ 1067725 (+)
G108515 NA non-coding downstream 136502 1070327 ~ 1070771 (+)
G108516 NA non-coding downstream 137469 1071294 ~ 1071772 (+)
G108519 NA non-coding downstream 229039 1162864 ~ 1193441 (+)
G108540 NA non-coding downstream 267469 1201294 ~ 1201681 (+)
AMCG00006246 slc39a7,LOC107395789,LOC106588393 other upstream 77795 846561 ~ 855720 (+)
G108319 NA other upstream 142453 774809 ~ 791062 (+)
AMCG00006236 NA other upstream 281375 644718 ~ 652140 (+)
AMCG00006231 NA other upstream 499610 426976 ~ 433905 (+)
AMCG00006218 NA other upstream 708162 219104 ~ 225353 (+)
AMCG00006256 NA other downstream 52048 985873 ~ 1003871 (+)
AMCG00006276 NA other downstream 344635 1278460 ~ 1286052 (+)
AMCG00006275 NA other downstream 353004 1286829 ~ 1315558 (+)
G108585 NA other downstream 416558 1350383 ~ 1429987 (+)
G108626 rps5,LOC107086176 other downstream 703572 1637397 ~ 1814610 (+)

Expression


Co-expression Network