Gene
RNA
| Item | Value |
|---|---|
| gene id | G108513 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 1067036 ~ 1067725 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0030163 | protein catabolic process | biological_process |
| GO:1901575 | organic substance catabolic process | biological_process |
| GO:0044257 | cellular protein catabolic process | biological_process |
| GO:0044265 | cellular macromolecule catabolic process | biological_process |
| GO:0051603 | proteolysis involved in cellular protein catabolic process | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU135742 | True | 524 | lncRNA | 0.55 | 2 | 1067036 | 1067725 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00006257 | NA | coding | upstream | 27756 | 1026203 ~ 1039280 (+) |
| AMCG00006254 | NA | coding | upstream | 84351 | 974658 ~ 982685 (+) |
| AMCG00006253 | NA | coding | upstream | 107133 | 950922 ~ 959903 (+) |
| AMCG00006249 | LOC106588375 | coding | upstream | 120388 | 932159 ~ 946648 (+) |
| AMCG00006251 | NA | coding | upstream | 137950 | 924614 ~ 929086 (+) |
| AMCG00006261 | NA | coding | downstream | 9568 | 1077293 ~ 1085987 (+) |
| AMCG00006262 | NA | coding | downstream | 21866 | 1089591 ~ 1098771 (+) |
| AMCG00006264 | NA | coding | downstream | 35055 | 1102780 ~ 1107716 (+) |
| AMCG00006263 | NA | coding | downstream | 76052 | 1143777 ~ 1147913 (+) |
| AMCG00006270 | NA | coding | downstream | 132096 | 1199821 ~ 1213094 (+) |
| G108496 | NA | non-coding | upstream | 133211 | 933515 ~ 933825 (+) |
| G108322 | NA | non-coding | upstream | 276203 | 789976 ~ 790833 (+) |
| G108308 | NA | non-coding | upstream | 284561 | 782025 ~ 782475 (+) |
| G108318 | NA | non-coding | upstream | 292997 | 773659 ~ 774039 (+) |
| G108314 | LOC106569953 | non-coding | upstream | 336850 | 727877 ~ 730186 (+) |
| G108515 | NA | non-coding | downstream | 2602 | 1070327 ~ 1070771 (+) |
| G108516 | NA | non-coding | downstream | 3569 | 1071294 ~ 1071772 (+) |
| G108519 | NA | non-coding | downstream | 95139 | 1162864 ~ 1193441 (+) |
| G108540 | NA | non-coding | downstream | 133569 | 1201294 ~ 1201681 (+) |
| G108555 | NA | non-coding | downstream | 150154 | 1217879 ~ 1221424 (+) |
| AMCG00006256 | NA | other | upstream | 63165 | 985873 ~ 1003871 (+) |
| AMCG00006246 | slc39a7,LOC107395789,LOC106588393 | other | upstream | 211316 | 846561 ~ 855720 (+) |
| G108319 | NA | other | upstream | 275974 | 774809 ~ 791062 (+) |
| AMCG00006236 | NA | other | upstream | 414896 | 644718 ~ 652140 (+) |
| AMCG00006231 | NA | other | upstream | 633131 | 426976 ~ 433905 (+) |
| AMCG00006276 | NA | other | downstream | 210735 | 1278460 ~ 1286052 (+) |
| AMCG00006275 | NA | other | downstream | 219104 | 1286829 ~ 1315558 (+) |
| G108585 | NA | other | downstream | 282658 | 1350383 ~ 1429987 (+) |
| G108626 | rps5,LOC107086176 | other | downstream | 569672 | 1637397 ~ 1814610 (+) |
| AMCG00006294 | NA | other | downstream | 668207 | 1735932 ~ 1741336 (+) |
