G108515


Basic Information

Item Value
gene id G108515
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 1070327 ~ 1070771 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU135744
gtccagtccagtgtaatacagtccagtgtaatacagtccagtccagtgtaatacagtccagtgtaatacagtccagtccagtgtaatacagtccagtgtgatacagtccagtccagtgtaatacagtccagtgtgatacagtccagtccagtgtaatacagtccagtgtaatacagtccagtccagtgtaatacagtccagtgtaatacagtccagtccagtgtaatacagtccagtgtaatacagtccagtccagtgtaatacagtccagtgtaatacagt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135744 True 282 lncRNA 0.44 3 1070327 1070771

Neighbor

gene id symbol gene type direction distance location
AMCG00006257 NA coding upstream 31047 1026203 ~ 1039280 (+)
AMCG00006254 NA coding upstream 87642 974658 ~ 982685 (+)
AMCG00006253 NA coding upstream 110424 950922 ~ 959903 (+)
AMCG00006249 LOC106588375 coding upstream 123679 932159 ~ 946648 (+)
AMCG00006251 NA coding upstream 141241 924614 ~ 929086 (+)
AMCG00006261 NA coding downstream 6522 1077293 ~ 1085987 (+)
AMCG00006262 NA coding downstream 18820 1089591 ~ 1098771 (+)
AMCG00006264 NA coding downstream 32009 1102780 ~ 1107716 (+)
AMCG00006263 NA coding downstream 73006 1143777 ~ 1147913 (+)
AMCG00006270 NA coding downstream 129050 1199821 ~ 1213094 (+)
G108513 NA non-coding upstream 2602 1067036 ~ 1067725 (+)
G108496 NA non-coding upstream 136502 933515 ~ 933825 (+)
G108322 NA non-coding upstream 279494 789976 ~ 790833 (+)
G108308 NA non-coding upstream 287852 782025 ~ 782475 (+)
G108318 NA non-coding upstream 296288 773659 ~ 774039 (+)
G108516 NA non-coding downstream 523 1071294 ~ 1071772 (+)
G108519 NA non-coding downstream 92093 1162864 ~ 1193441 (+)
G108540 NA non-coding downstream 130523 1201294 ~ 1201681 (+)
G108555 NA non-coding downstream 147108 1217879 ~ 1221424 (+)
G108580 NA non-coding downstream 272781 1343552 ~ 1343755 (+)
AMCG00006256 NA other upstream 66456 985873 ~ 1003871 (+)
AMCG00006246 slc39a7,LOC107395789,LOC106588393 other upstream 214607 846561 ~ 855720 (+)
G108319 NA other upstream 279265 774809 ~ 791062 (+)
AMCG00006236 NA other upstream 418187 644718 ~ 652140 (+)
AMCG00006231 NA other upstream 636422 426976 ~ 433905 (+)
AMCG00006276 NA other downstream 207689 1278460 ~ 1286052 (+)
AMCG00006275 NA other downstream 216058 1286829 ~ 1315558 (+)
G108585 NA other downstream 279612 1350383 ~ 1429987 (+)
G108626 rps5,LOC107086176 other downstream 566626 1637397 ~ 1814610 (+)
AMCG00006294 NA other downstream 665161 1735932 ~ 1741336 (+)

Expression


Co-expression Network