G108516


Basic Information

Item Value
gene id G108516
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 1071294 ~ 1071772 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU135746
CAGGCTGTTCAGTGTGGGCCGCTGTGCGCGCTGTGCTCAGCCAATCCCTTCCTCCGCCCTGGTCATGAGGTCAGGACCCCTGACCTTTCACCCCCACTGCTTCACCTGCCAGgtgtgtgGGGTGGTTCTGTTGCCCGGAGACTTGTACAGCCTGAAGGGGAGGAGCCTGTACTGTCAATCACATTACCACAGCAACAGGCCTCGACCCCGGAGACTGCGCCACAGAGAccgagggagagagacagagacagatggagagagagacagggacaggggTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135746 True 278 lncRNA 0.61 2 1071294 1071772

Neighbor

gene id symbol gene type direction distance location
AMCG00006257 NA coding upstream 32014 1026203 ~ 1039280 (+)
AMCG00006254 NA coding upstream 88609 974658 ~ 982685 (+)
AMCG00006253 NA coding upstream 111391 950922 ~ 959903 (+)
AMCG00006249 LOC106588375 coding upstream 124646 932159 ~ 946648 (+)
AMCG00006251 NA coding upstream 142208 924614 ~ 929086 (+)
AMCG00006261 NA coding downstream 5521 1077293 ~ 1085987 (+)
AMCG00006262 NA coding downstream 17819 1089591 ~ 1098771 (+)
AMCG00006264 NA coding downstream 31008 1102780 ~ 1107716 (+)
AMCG00006263 NA coding downstream 72005 1143777 ~ 1147913 (+)
AMCG00006270 NA coding downstream 128049 1199821 ~ 1213094 (+)
G108515 NA non-coding upstream 523 1070327 ~ 1070771 (+)
G108513 NA non-coding upstream 3569 1067036 ~ 1067725 (+)
G108496 NA non-coding upstream 137469 933515 ~ 933825 (+)
G108322 NA non-coding upstream 280461 789976 ~ 790833 (+)
G108308 NA non-coding upstream 288819 782025 ~ 782475 (+)
G108519 NA non-coding downstream 91092 1162864 ~ 1193441 (+)
G108540 NA non-coding downstream 129522 1201294 ~ 1201681 (+)
G108555 NA non-coding downstream 146107 1217879 ~ 1221424 (+)
G108580 NA non-coding downstream 271780 1343552 ~ 1343755 (+)
G108584 NA non-coding downstream 278279 1350051 ~ 1397427 (+)
AMCG00006256 NA other upstream 67423 985873 ~ 1003871 (+)
AMCG00006246 slc39a7,LOC107395789,LOC106588393 other upstream 215574 846561 ~ 855720 (+)
G108319 NA other upstream 280232 774809 ~ 791062 (+)
AMCG00006236 NA other upstream 419154 644718 ~ 652140 (+)
AMCG00006231 NA other upstream 637389 426976 ~ 433905 (+)
AMCG00006276 NA other downstream 206688 1278460 ~ 1286052 (+)
AMCG00006275 NA other downstream 215057 1286829 ~ 1315558 (+)
G108585 NA other downstream 278611 1350383 ~ 1429987 (+)
G108626 rps5,LOC107086176 other downstream 565625 1637397 ~ 1814610 (+)
AMCG00006294 NA other downstream 664160 1735932 ~ 1741336 (+)

Expression


Co-expression Network