G108540


Basic Information

Item Value
gene id G108540
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 1201294 ~ 1201681 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU135776
gtcagtgttaatgtgctatagtgtccagtcagtcagtcagtgttaatgtgctgtggtgtccagtcagtcagtcagcgttaatgtgctgtagtgtccagtcagtcagtcagtgttaatgtgctgtagtgtccagtcagtcagtgttaatgtgctgtagtgtccagtcagtcagtgttaatgtgctgtagtgtccagtcagtcagtcagtcagtgttaatgtgctgtagtgtccagtcagtcagtgttaatgtgctgtagtgtccagtcagtcagtcagtgttaatgtgctgtagtgtccagtcagtcagtcagtgttaatggactgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135776 True 326 lncRNA 0.46 2 1201294 1201681

Neighbor

gene id symbol gene type direction distance location
AMCG00006263 NA coding upstream 53381 1143777 ~ 1147913 (+)
AMCG00006264 NA coding upstream 93578 1102780 ~ 1107716 (+)
AMCG00006262 NA coding upstream 102523 1089591 ~ 1098771 (+)
AMCG00006261 NA coding upstream 115307 1077293 ~ 1085987 (+)
AMCG00006257 NA coding upstream 162014 1026203 ~ 1039280 (+)
AMCG00006269 NA coding downstream 63851 1265532 ~ 1272008 (+)
AMCG00006282 NA coding downstream 158929 1360610 ~ 1415163 (+)
AMCG00006281 NA coding downstream 222726 1424407 ~ 1433866 (+)
AMCG00006287 NA coding downstream 335226 1536907 ~ 1545850 (+)
AMCG00006286 NA coding downstream 371447 1573128 ~ 1574818 (+)
G108519 NA non-coding upstream 7853 1162864 ~ 1193441 (+)
G108516 NA non-coding upstream 129522 1071294 ~ 1071772 (+)
G108515 NA non-coding upstream 130523 1070327 ~ 1070771 (+)
G108513 NA non-coding upstream 133569 1067036 ~ 1067725 (+)
G108496 NA non-coding upstream 267469 933515 ~ 933825 (+)
G108555 NA non-coding downstream 16198 1217879 ~ 1221424 (+)
G108580 NA non-coding downstream 141871 1343552 ~ 1343755 (+)
G108584 NA non-coding downstream 148370 1350051 ~ 1397427 (+)
G108587 NA non-coding downstream 151137 1352818 ~ 1554665 (+)
G108595 NA non-coding downstream 271691 1473372 ~ 1474967 (+)
AMCG00006256 NA other upstream 197423 985873 ~ 1003871 (+)
AMCG00006246 slc39a7,LOC107395789,LOC106588393 other upstream 345574 846561 ~ 855720 (+)
G108319 NA other upstream 410232 774809 ~ 791062 (+)
AMCG00006236 NA other upstream 549154 644718 ~ 652140 (+)
AMCG00006231 NA other upstream 767389 426976 ~ 433905 (+)
AMCG00006276 NA other downstream 76779 1278460 ~ 1286052 (+)
AMCG00006275 NA other downstream 85148 1286829 ~ 1315558 (+)
G108585 NA other downstream 148702 1350383 ~ 1429987 (+)
G108626 rps5,LOC107086176 other downstream 435716 1637397 ~ 1814610 (+)
AMCG00006294 NA other downstream 534251 1735932 ~ 1741336 (+)

Expression


Co-expression Network