G108580


Basic Information

Item Value
gene id G108580
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 1343552 ~ 1343755 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU135825
ctaatctcagctcgttacctgtataaaagacacctgggagccagaaatcttgctgattgataggggatcaaatacttatttccctcattaacatgcaaatcaatttataacttttttgaaatgcgtttctctggatttttttgttgttattctgtctctcactgttaaaatacacctaccattaaaattatagactgatcattt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135825 True 204 lncRNA 0.33 1 1343552 1343755

Neighbor

gene id symbol gene type direction distance location
AMCG00006269 NA coding upstream 71544 1265532 ~ 1272008 (+)
AMCG00006270 NA coding upstream 130458 1199821 ~ 1213094 (+)
AMCG00006263 NA coding upstream 195639 1143777 ~ 1147913 (+)
AMCG00006264 NA coding upstream 235836 1102780 ~ 1107716 (+)
AMCG00006262 NA coding upstream 244781 1089591 ~ 1098771 (+)
AMCG00006282 NA coding downstream 16855 1360610 ~ 1415163 (+)
AMCG00006281 NA coding downstream 80652 1424407 ~ 1433866 (+)
AMCG00006287 NA coding downstream 193152 1536907 ~ 1545850 (+)
AMCG00006286 NA coding downstream 229373 1573128 ~ 1574818 (+)
AMCG00006288 NA coding downstream 294304 1638059 ~ 1647130 (+)
G108555 NA non-coding upstream 122128 1217879 ~ 1221424 (+)
G108540 NA non-coding upstream 141871 1201294 ~ 1201681 (+)
G108519 NA non-coding upstream 150111 1162864 ~ 1193441 (+)
G108516 NA non-coding upstream 271780 1071294 ~ 1071772 (+)
G108515 NA non-coding upstream 272781 1070327 ~ 1070771 (+)
G108584 NA non-coding downstream 6296 1350051 ~ 1397427 (+)
G108587 NA non-coding downstream 9063 1352818 ~ 1554665 (+)
G108595 NA non-coding downstream 129617 1473372 ~ 1474967 (+)
G108602 NA non-coding downstream 143557 1487312 ~ 1487870 (+)
G108605 NA non-coding downstream 150609 1494364 ~ 1495708 (+)
AMCG00006275 NA other upstream 27994 1286829 ~ 1315558 (+)
AMCG00006276 NA other upstream 57500 1278460 ~ 1286052 (+)
AMCG00006256 NA other upstream 339681 985873 ~ 1003871 (+)
AMCG00006246 slc39a7,LOC107395789,LOC106588393 other upstream 487832 846561 ~ 855720 (+)
G108319 NA other upstream 552490 774809 ~ 791062 (+)
G108585 NA other downstream 6628 1350383 ~ 1429987 (+)
G108626 rps5,LOC107086176 other downstream 293642 1637397 ~ 1814610 (+)
AMCG00006294 NA other downstream 392177 1735932 ~ 1741336 (+)
AMCG00006366 NA other downstream 1899182 3242937 ~ 3252080 (+)
AMCG00006368 NA other downstream 1931027 3274782 ~ 3286179 (+)

Expression


Co-expression Network