G108585


Basic Information

Item Value
gene id G108585
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 1350383 ~ 1429987 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU135836
TTCACAGATCAAAGAGATACATATTTCATaaacttctttaaaaaaatataaacacaaaatacctGTTATATTTAAGGATATTCTTTGGGTTTCACTTACCTGACAGTGTGTTCAGAGCAAACGTCCTGTGGGTCTTTTTGGGTCCAGAGTCCTTGTCTCTCTGACAGCAGTACAGCCCAGCGTCCCCCGTCTGCACATTGTGTATCAGCAGTGAGGAGTTGGCTGACATCACCGCTCTCCCACTGTGTGGGACTGTCCCTTTCAGAGGCGTTTCAGTCAGGGATCTTAAGCTGTACAGCACCACGGCCTGGCTGGTACGAGATTGTCTGTAGGTCCACCGCAGTGTCTCTCCTGGTCCCAGACTGACAGGAGCCACACAGGACAGGAGCAGGAGCCACACTGCGGTGGACCTACAGACAATCTCGTACCAGCCAGGCCGTGGTGCTGTACAGCTTAAGATCCCTGACTGAAACGCCTCTGAAAGGGACAGTCCCACACAGTGGGAGAGCGGTGATGTCAGCCAACTCCTCACTGCTGATACACAATGTGCAGACGGGGGACGCTGGGCTGTACTGCTGTCAGAGAGACAAGGACTCTGGACCCAAAAAGACCCACAGGACGTTTGCTCTGAACACACTGTCAGTGAGTTCAAACCTGAGTGAAGAGGCACAGAATGGCTCTGCTGTCACCCTGACCTGCTCCCTCACCTGTGGGTTCGACTGTGAGGAAAACACTGAACTGATCTGGAGGGACAGTACAGGGAACAGCCTGCAGGGTGGCACCAGTGAGCGCAACAAGAGCACCATCAGCTCCCAGCTGGTCCTTCAGCCCCAGAGCTCTGAGAGGATCCGGtgcagtgtggagagagaggggctggaGAGAGTGAGCCAGGACTGGACCATAAAGATAGAGGCTGGACCAGGGTCTGCAGTGGAGCTGGCGGTGAGACTGACTGTGTTCTTCATCGCTCTGATCGCCCCTCTGGTCGCTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135836 True 992 TUCP 0.54 4 1350383 1429987

Neighbor

gene id symbol gene type direction distance location
AMCG00006269 NA coding upstream 78375 1265532 ~ 1272008 (+)
AMCG00006270 NA coding upstream 137289 1199821 ~ 1213094 (+)
AMCG00006263 NA coding upstream 202470 1143777 ~ 1147913 (+)
AMCG00006264 NA coding upstream 242667 1102780 ~ 1107716 (+)
AMCG00006262 NA coding upstream 251612 1089591 ~ 1098771 (+)
AMCG00006287 NA coding downstream 106920 1536907 ~ 1545850 (+)
AMCG00006286 NA coding downstream 143141 1573128 ~ 1574818 (+)
AMCG00006288 NA coding downstream 208072 1638059 ~ 1647130 (+)
AMCG00006289 csnk2b,LOC101472534,LOC106588218,LOC101175345,LOC107677476,LOC106517726 coding downstream 230651 1660638 ~ 1661843 (+)
AMCG00006293 NA coding downstream 285496 1715483 ~ 1721110 (+)
G108580 NA non-coding upstream 6628 1343552 ~ 1343755 (+)
G108555 NA non-coding upstream 128959 1217879 ~ 1221424 (+)
G108540 NA non-coding upstream 148702 1201294 ~ 1201681 (+)
G108519 NA non-coding upstream 156942 1162864 ~ 1193441 (+)
G108516 NA non-coding upstream 278611 1071294 ~ 1071772 (+)
G108595 NA non-coding downstream 43385 1473372 ~ 1474967 (+)
G108602 NA non-coding downstream 57325 1487312 ~ 1487870 (+)
G108605 NA non-coding downstream 64377 1494364 ~ 1495708 (+)
G108632 NA non-coding downstream 221068 1651055 ~ 1651459 (+)
G108831 NA non-coding downstream 459540 1889527 ~ 1890035 (+)
AMCG00006275 NA other upstream 34825 1286829 ~ 1315558 (+)
AMCG00006276 NA other upstream 64331 1278460 ~ 1286052 (+)
AMCG00006256 NA other upstream 346512 985873 ~ 1003871 (+)
AMCG00006246 slc39a7,LOC107395789,LOC106588393 other upstream 494663 846561 ~ 855720 (+)
G108319 NA other upstream 559321 774809 ~ 791062 (+)
G108626 rps5,LOC107086176 other downstream 207410 1637397 ~ 1814610 (+)
AMCG00006294 NA other downstream 305945 1735932 ~ 1741336 (+)
AMCG00006366 NA other downstream 1812950 3242937 ~ 3252080 (+)
AMCG00006368 NA other downstream 1844795 3274782 ~ 3286179 (+)
G109309 NA other downstream 1931367 3361354 ~ 3365565 (+)

Expression


Co-expression Network