G108587


Basic Information

Item Value
gene id G108587
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 1352818 ~ 1554665 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU135839
TGGAGAGCAGGAAGAGAGTAACAGGTAATCCAGATGTATAATGCTTTCCATTGACATACTGATGACAGTTGTACTGTCCAGTGTCCCGTGTCCTGAGTCTGTCTATGTGCAGAGAGCTGTTAGACCCCAGTCTCAGTCTGCCAGCTCTGTCTGGATCTGTGTCTGTGATCATCCCACCACGGCTCAGTTCTACAGTTGTCTCGGATCTGTGATTAAACACCCAGGATATATAGGAGTTGTGATATTCTGTCAGTCCGTCACAAGGCACTGTCACTGAGGCNN

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135839 True 282 lncRNA 0.48 2 1352818 1554665

Neighbor

gene id symbol gene type direction distance location
AMCG00006269 NA coding upstream 80810 1265532 ~ 1272008 (+)
AMCG00006270 NA coding upstream 139724 1199821 ~ 1213094 (+)
AMCG00006263 NA coding upstream 204905 1143777 ~ 1147913 (+)
AMCG00006264 NA coding upstream 245102 1102780 ~ 1107716 (+)
AMCG00006262 NA coding upstream 254047 1089591 ~ 1098771 (+)
AMCG00006286 NA coding downstream 18463 1573128 ~ 1574818 (+)
AMCG00006288 NA coding downstream 83394 1638059 ~ 1647130 (+)
AMCG00006289 csnk2b,LOC101472534,LOC106588218,LOC101175345,LOC107677476,LOC106517726 coding downstream 105973 1660638 ~ 1661843 (+)
AMCG00006293 NA coding downstream 160818 1715483 ~ 1721110 (+)
AMCG00006295 NA coding downstream 175144 1729809 ~ 1734311 (+)
G108580 NA non-coding upstream 9063 1343552 ~ 1343755 (+)
G108555 NA non-coding upstream 131394 1217879 ~ 1221424 (+)
G108540 NA non-coding upstream 151137 1201294 ~ 1201681 (+)
G108519 NA non-coding upstream 159377 1162864 ~ 1193441 (+)
G108516 NA non-coding upstream 281046 1071294 ~ 1071772 (+)
G108632 NA non-coding downstream 96390 1651055 ~ 1651459 (+)
G108831 NA non-coding downstream 334862 1889527 ~ 1890035 (+)
G108832 NA non-coding downstream 336371 1891036 ~ 1892425 (+)
G108833 NA non-coding downstream 338198 1892863 ~ 1893487 (+)
G108847 NA non-coding downstream 397549 1952214 ~ 1953042 (+)
AMCG00006275 NA other upstream 37260 1286829 ~ 1315558 (+)
AMCG00006276 NA other upstream 66766 1278460 ~ 1286052 (+)
AMCG00006256 NA other upstream 348947 985873 ~ 1003871 (+)
AMCG00006246 slc39a7,LOC107395789,LOC106588393 other upstream 497098 846561 ~ 855720 (+)
G108319 NA other upstream 561756 774809 ~ 791062 (+)
G108626 rps5,LOC107086176 other downstream 82732 1637397 ~ 1814610 (+)
AMCG00006294 NA other downstream 181267 1735932 ~ 1741336 (+)
AMCG00006366 NA other downstream 1688272 3242937 ~ 3252080 (+)
AMCG00006368 NA other downstream 1720117 3274782 ~ 3286179 (+)
G109309 NA other downstream 1806689 3361354 ~ 3365565 (+)

Expression


Co-expression Network