G108632


Basic Information

Item Value
gene id G108632
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 1651055 ~ 1651459 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU135905
CTAAAAGTGGAGAAGTGTCCTCACCTGCTCTTCGGAGTGTGGATATTTTTGGAGAACCTCTTCGGAGtgtaatttacaattttttCCCTCTTCGGAGTCTAGACTACTGTCTTTTACGAGCTTCTGCTTCTCTTCAAAGATTCGAGTGACGGAAATAGAAAAAGGGGAGAAGGAAACTATTCCAGCTGGAGCAGCTTCCTGCAGTTGGTCGGTTGACCATCCCGCTTGAACTTTTCTTCAATATCCACACTGTCTAGACTTCTGTCTGTGGACTTTAAACATCCGACATATCAACCACTCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135905 True 302 lncRNA 0.44 2 1651055 1651459

Neighbor

gene id symbol gene type direction distance location
AMCG00006288 NA coding upstream 3925 1638059 ~ 1647130 (+)
AMCG00006286 NA coding upstream 76237 1573128 ~ 1574818 (+)
AMCG00006287 NA coding upstream 105205 1536907 ~ 1545850 (+)
AMCG00006281 NA coding upstream 217189 1424407 ~ 1433866 (+)
AMCG00006282 NA coding upstream 235892 1360610 ~ 1415163 (+)
AMCG00006289 csnk2b,LOC101472534,LOC106588218,LOC101175345,LOC107677476,LOC106517726 coding downstream 9179 1660638 ~ 1661843 (+)
AMCG00006293 NA coding downstream 64024 1715483 ~ 1721110 (+)
AMCG00006295 NA coding downstream 78350 1729809 ~ 1734311 (+)
AMCG00006296 NA coding downstream 91583 1743042 ~ 1752407 (+)
AMCG00006297 NA coding downstream 101310 1752769 ~ 1753029 (+)
G108587 NA non-coding upstream 96390 1352818 ~ 1554665 (+)
G108605 NA non-coding upstream 155347 1494364 ~ 1495708 (+)
G108602 NA non-coding upstream 163185 1487312 ~ 1487870 (+)
G108595 NA non-coding upstream 176088 1473372 ~ 1474967 (+)
G108584 NA non-coding upstream 253628 1350051 ~ 1397427 (+)
G108831 NA non-coding downstream 238068 1889527 ~ 1890035 (+)
G108832 NA non-coding downstream 239577 1891036 ~ 1892425 (+)
G108833 NA non-coding downstream 241404 1892863 ~ 1893487 (+)
G108847 NA non-coding downstream 300755 1952214 ~ 1953042 (+)
G108854 NA non-coding downstream 340156 1991615 ~ 2011808 (+)
G108585 NA other upstream 221068 1350383 ~ 1429987 (+)
AMCG00006275 NA other upstream 335497 1286829 ~ 1315558 (+)
AMCG00006276 NA other upstream 365003 1278460 ~ 1286052 (+)
AMCG00006256 NA other upstream 647184 985873 ~ 1003871 (+)
AMCG00006246 slc39a7,LOC107395789,LOC106588393 other upstream 795335 846561 ~ 855720 (+)
AMCG00006294 NA other downstream 84473 1735932 ~ 1741336 (+)
AMCG00006366 NA other downstream 1591478 3242937 ~ 3252080 (+)
AMCG00006368 NA other downstream 1623323 3274782 ~ 3286179 (+)
G109309 NA other downstream 1709895 3361354 ~ 3365565 (+)
G109362 NA other downstream 1851722 3503181 ~ 3506679 (+)

Expression


Co-expression Network