G108655


Basic Information

Item Value
gene id G108655
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 933515 ~ 933825 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU135930
gtgtccagtcagtgttaatgtgctgtagtgtccagtcagtcagtgttaatgtgctgtagtgtccagtcagtcagtcagtgttaatgtactgtagtgtccagtcagtcagtgttaatgtcctgtagtgttcagtcagtcagtgttaatgtgctgtagtgtccagtcagtcagtcagtgttaatgtgctgtagtgtccagtcagtcagtcagtcagtgttaatgtgctgtagtgtccagtcagtcagtcag

Function

GO:

id name namespace
GO:0060841 venous blood vessel development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135930 True 249 lncRNA 0.45 2 933515 933825

Neighbor

gene id symbol gene type direction distance location
AMCG00006255 NA coding downstream 32670 896978 ~ 900845 (-)
AMCG00006248 rxrba,rxrb,LOC107729870,LOC107566635,LOC107751683 coding downstream 147930 774474 ~ 785585 (-)
AMCG00006244 NA coding downstream 213122 711832 ~ 720393 (-)
AMCG00006239 NA coding downstream 246956 676584 ~ 686559 (-)
AMCG00006242 NA coding downstream 257755 665586 ~ 675760 (-)
AMCG00006259 NA coding upstream 109037 1042862 ~ 1047510 (-)
AMCG00006260 NA coding upstream 114353 1048178 ~ 1049728 (-)
AMCG00006258 psb7,LOC106569939,LOC106588382 coding upstream 134229 1068054 ~ 1073294 (-)
AMCG00006265 NA coding upstream 222902 1156727 ~ 1160200 (-)
AMCG00006268 rnf5,LOC107694772 coding upstream 229475 1163300 ~ 1170846 (-)
G108491 NA non-coding downstream 24487 907890 ~ 909028 (-)
G108484 NA non-coding downstream 43713 889073 ~ 889802 (-)
G108480 NA non-coding downstream 75200 857794 ~ 858315 (-)
G108478 NA non-coding downstream 77843 852284 ~ 855672 (-)
G108461 NA non-coding downstream 121552 811735 ~ 811963 (-)
G108664 NA non-coding upstream 19467 953292 ~ 958678 (-)
G108689 NA non-coding upstream 106393 1040218 ~ 1101292 (-)
G108705 NA non-coding upstream 175826 1109651 ~ 1119698 (-)
G108717 NA non-coding upstream 246757 1180582 ~ 1201681 (-)
G108682 NA non-coding upstream 358213 1292038 ~ 1306880 (-)
AMCG00006247 NA other downstream 59021 838855 ~ 874494 (-)
AMCG00006245 LOC106569953,LOC106588396,LOC107101422,LOC107103722 other downstream 184779 726064 ~ 748736 (-)
AMCG00006243 NA other downstream 231575 700535 ~ 701940 (-)
AMCG00006241 NA other downstream 371100 479582 ~ 562415 (-)
AMCG00006232 LOC107694105,LOC107737194,LOC107751684,LOC107575376 other downstream 535616 393832 ~ 397899 (-)
G108708 NA other upstream 192737 1126562 ~ 1134690 (-)
AMCG00006266 NA other upstream 201076 1134901 ~ 1137952 (-)
AMCG00006274 zbtb12,LOC106570057,LOC106588515 other upstream 277461 1211286 ~ 1216184 (-)
AMCG00006277 prrt1,LOC108272790,LOC107694357 other upstream 403362 1337187 ~ 1341665 (-)
AMCG00006292 NA other upstream 410691 1344516 ~ 1637731 (-)

Expression


Co-expression Network