G108664


Basic Information

Item Value
gene id G108664
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 953292 ~ 958678 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU135942
GTTtcgaatttgaattgaatttgaggagagacagagagtgataCCTGTCACATTGAGGATGATGTCTCTGTAGCTGCTCCCACTGCCCTCACACCTGTAGTCACCCTGGTCCCTCTCAGTcaggtgagagaggaggagagagaggtttCCAGGAGAGACAGAGTTAAACAGCCGCACTCTGTCTCTGTAGCTGGAGTGGACGGTCCCATCAGAGTCCACTATCACAGTGATACTCGGTCCTGGGTTGAGAATCCACCTGAGTGTCTCAGGCTGAGAGCGAGGGTCAGTGCAGGAGCAGGACAGGAGGACTGAGGCTCCAGAGAGAGCAGAGATCACAGTGGGACCAGGGTCTGACACAGTGCAGCCTGGAgtacaaaacacacagtca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135942 True 388 lncRNA 0.53 2 953292 958678

Neighbor

gene id symbol gene type direction distance location
AMCG00006255 NA coding downstream 52447 896978 ~ 900845 (-)
AMCG00006248 rxrba,rxrb,LOC107729870,LOC107566635,LOC107751683 coding downstream 167707 774474 ~ 785585 (-)
AMCG00006244 NA coding downstream 232899 711832 ~ 720393 (-)
AMCG00006239 NA coding downstream 266733 676584 ~ 686559 (-)
AMCG00006242 NA coding downstream 277532 665586 ~ 675760 (-)
AMCG00006259 NA coding upstream 84184 1042862 ~ 1047510 (-)
AMCG00006260 NA coding upstream 89500 1048178 ~ 1049728 (-)
AMCG00006258 psb7,LOC106569939,LOC106588382 coding upstream 109376 1068054 ~ 1073294 (-)
AMCG00006265 NA coding upstream 198049 1156727 ~ 1160200 (-)
AMCG00006268 rnf5,LOC107694772 coding upstream 204622 1163300 ~ 1170846 (-)
G108655 NA non-coding downstream 19467 933515 ~ 933825 (-)
G108491 NA non-coding downstream 44264 907890 ~ 909028 (-)
G108484 NA non-coding downstream 63490 889073 ~ 889802 (-)
G108480 NA non-coding downstream 94977 857794 ~ 858315 (-)
G108478 NA non-coding downstream 97620 852284 ~ 855672 (-)
G108689 NA non-coding upstream 81540 1040218 ~ 1101292 (-)
G108705 NA non-coding upstream 150973 1109651 ~ 1119698 (-)
G108717 NA non-coding upstream 221904 1180582 ~ 1201681 (-)
G108682 NA non-coding upstream 333360 1292038 ~ 1306880 (-)
G108750 NA non-coding upstream 362020 1320698 ~ 1321213 (-)
AMCG00006247 NA other downstream 78798 838855 ~ 874494 (-)
AMCG00006245 LOC106569953,LOC106588396,LOC107101422,LOC107103722 other downstream 204556 726064 ~ 748736 (-)
AMCG00006243 NA other downstream 251352 700535 ~ 701940 (-)
AMCG00006241 NA other downstream 390877 479582 ~ 562415 (-)
AMCG00006232 LOC107694105,LOC107737194,LOC107751684,LOC107575376 other downstream 555393 393832 ~ 397899 (-)
G108708 NA other upstream 167884 1126562 ~ 1134690 (-)
AMCG00006266 NA other upstream 176223 1134901 ~ 1137952 (-)
AMCG00006274 zbtb12,LOC106570057,LOC106588515 other upstream 252608 1211286 ~ 1216184 (-)
AMCG00006277 prrt1,LOC108272790,LOC107694357 other upstream 378509 1337187 ~ 1341665 (-)
AMCG00006292 NA other upstream 385838 1344516 ~ 1637731 (-)

Expression


Co-expression Network