G108682


Basic Information

Item Value
gene id G108682
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 1292038 ~ 1306880 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU135963
CTCCTGACacacagaccctaatacagaccccacagacactcctgacacacagaccctaatacagaccccacagacactcctgacacacagaccctaatacagaccccacagacactcctgacacagAGAGATCAGCAGAGTGTAATAACTCAGGCACTTTGCGACGCACCGGGCTTGTCGTGAGATCTTGACGTCCTCCTGCAGCTCAATAAGTGCAATGTCATAATCATAGAACTCTGGGATCCCCTGGTCTGCCTTCAGTCCTGGGTTGAACTGGGGATGGGTTATGATCCCAATTATTT

Function

NR:

description
melanoma-associated antigen C1-like

GO:

id name namespace
GO:0060841 venous blood vessel development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135963 True 302 lncRNA 0.51 2 1292038 1306880

Neighbor

gene id symbol gene type direction distance location
AMCG00006273 NA coding downstream 30459 1248142 ~ 1261579 (-)
AMCG00006272 NA coding downstream 92044 1193270 ~ 1199994 (-)
AMCG00006271 NA coding downstream 100957 1181710 ~ 1191081 (-)
AMCG00006267 NA coding downstream 112974 1171681 ~ 1179064 (-)
AMCG00006268 rnf5,LOC107694772 coding downstream 121192 1163300 ~ 1170846 (-)
AMCG00006285 NA coding upstream 187480 1494360 ~ 1498054 (-)
AMCG00006283 NA coding upstream 243563 1550443 ~ 1555554 (-)
AMCG00006291 NA coding upstream 288792 1595672 ~ 1599457 (-)
AMCG00006290 NA coding upstream 371382 1678262 ~ 1683356 (-)
AMCG00006299 NA coding upstream 386363 1693243 ~ 1709505 (-)
G108717 NA non-coding downstream 90357 1180582 ~ 1201681 (-)
G108705 NA non-coding downstream 172340 1109651 ~ 1119698 (-)
G108689 NA non-coding downstream 190746 1040218 ~ 1101292 (-)
G108664 NA non-coding downstream 333360 953292 ~ 958678 (-)
G108655 NA non-coding downstream 358213 933515 ~ 933825 (-)
G108750 NA non-coding upstream 13818 1320698 ~ 1321213 (-)
G108752 NA non-coding upstream 21922 1328802 ~ 1332044 (-)
G108756 NA non-coding upstream 43205 1350085 ~ 1397331 (-)
G108760 NA non-coding upstream 98513 1405393 ~ 1409747 (-)
G108770 NA non-coding upstream 197318 1504198 ~ 1560390 (-)
AMCG00006274 zbtb12,LOC106570057,LOC106588515 other downstream 75854 1211286 ~ 1216184 (-)
AMCG00006266 NA other downstream 154086 1134901 ~ 1137952 (-)
G108708 NA other downstream 157348 1126562 ~ 1134690 (-)
AMCG00006247 NA other downstream 417544 838855 ~ 874494 (-)
AMCG00006245 LOC106569953,LOC106588396,LOC107101422,LOC107103722 other downstream 543302 726064 ~ 748736 (-)
AMCG00006277 prrt1,LOC108272790,LOC107694357 other upstream 30307 1337187 ~ 1341665 (-)
AMCG00006292 NA other upstream 37636 1344516 ~ 1637731 (-)
G108755 NA other upstream 43605 1350485 ~ 1554664 (-)
AMCG00006279 NA other upstream 51517 1358397 ~ 1510540 (-)
AMCG00006284 prrc2a other upstream 166598 1473478 ~ 1493970 (-)

Expression


Co-expression Network