G108717


Basic Information

Item Value
gene id G108717
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 1180582 ~ 1201681 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU136017
acagtccattaacactgactgactgactggacactacagcacattaacactgactgactgactggacactacagcacattaacactgactgactggacactacagcacattaacactgactgactgactgactggacactacagcacattaacactgactgactggacactacagcacattaacactgactgactggacactacagcacattaacactgactgactgactggacactacagcacattaacgctgactgactgactggacaccacagcacattaacactgactgactgactggacactatagcacattaacactg
>TU136018
acagtccattaacactgactgactgactggacactacagcacattaacactgactgactgactggacactacagcacattaacactgactgactggacactacagcacattaacactgactgactgactgactgactggacactacagcacattaacactgactgactg

Function

GO:

id name namespace
GO:0060841 venous blood vessel development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136017 True 324 lncRNA 0.46 2 1201296 1201681
TU136018 False 169 lncRNA 0.46 3 1180582 1201681

Neighbor

gene id symbol gene type direction distance location
AMCG00006267 NA coding downstream 1518 1171681 ~ 1179064 (-)
AMCG00006268 rnf5,LOC107694772 coding downstream 9736 1163300 ~ 1170846 (-)
AMCG00006265 NA coding downstream 20382 1156727 ~ 1160200 (-)
AMCG00006258 psb7,LOC106569939,LOC106588382 coding downstream 107288 1068054 ~ 1073294 (-)
AMCG00006260 NA coding downstream 130854 1048178 ~ 1049728 (-)
AMCG00006273 NA coding upstream 46461 1248142 ~ 1261579 (-)
AMCG00006280 NA coding upstream 91715 1293396 ~ 1297970 (-)
AMCG00006278 nelfe coding upstream 97156 1298837 ~ 1300643 (-)
AMCG00006285 NA coding upstream 292679 1494360 ~ 1498054 (-)
AMCG00006283 NA coding upstream 348762 1550443 ~ 1555554 (-)
G108705 NA non-coding downstream 60884 1109651 ~ 1119698 (-)
G108689 NA non-coding downstream 79290 1040218 ~ 1101292 (-)
G108664 NA non-coding downstream 221904 953292 ~ 958678 (-)
G108655 NA non-coding downstream 246757 933515 ~ 933825 (-)
G108491 NA non-coding downstream 271554 907890 ~ 909028 (-)
G108682 NA non-coding upstream 90357 1292038 ~ 1306880 (-)
G108750 NA non-coding upstream 119017 1320698 ~ 1321213 (-)
G108752 NA non-coding upstream 127121 1328802 ~ 1332044 (-)
G108756 NA non-coding upstream 148404 1350085 ~ 1397331 (-)
G108760 NA non-coding upstream 203712 1405393 ~ 1409747 (-)
AMCG00006266 NA other downstream 42630 1134901 ~ 1137952 (-)
G108708 NA other downstream 45892 1126562 ~ 1134690 (-)
AMCG00006247 NA other downstream 306088 838855 ~ 874494 (-)
AMCG00006245 LOC106569953,LOC106588396,LOC107101422,LOC107103722 other downstream 431846 726064 ~ 748736 (-)
AMCG00006243 NA other downstream 478642 700535 ~ 701940 (-)
AMCG00006274 zbtb12,LOC106570057,LOC106588515 other upstream 9605 1211286 ~ 1216184 (-)
AMCG00006277 prrt1,LOC108272790,LOC107694357 other upstream 135506 1337187 ~ 1341665 (-)
AMCG00006292 NA other upstream 142835 1344516 ~ 1637731 (-)
G108755 NA other upstream 148804 1350485 ~ 1554664 (-)
AMCG00006279 NA other upstream 156716 1358397 ~ 1510540 (-)

Expression


Co-expression Network