G108752


Basic Information

Item Value
gene id G108752
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 1328802 ~ 1332044 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU136060
ccgagagacagccagagagagagagagagagagagagagacggttCGTCTGCATGTATGTGAGCGAAAGGGAGAGCCAGCCAGTGCACAATCTCTGAtgctgtgattgtgtttgtgctgaAGTGTGAGTGATTTGTGTGTTcctaggtgtgtgtgtgtgtatctgtctctgcctgtctgtctgtgtgctgatGTGTGAGTGAGTGGATTTTTGTCCCttgaagtgtgtgtttgtgtctgtgtgtgtgtgttagtttgtGTGCCTTTATGCCTCTGTGTTGGTGTCACTGAAGTGTACGtctatgtgagtgtgtgttggagTCTTGGTGTactgaagtgtgtgtttgtgtttcacttCTGCAACTCTGCTACAGCAACAGGATGTGGTGAGaagcagcagcggcagcagcagcggtcTAGCCTTCTATATTCTCACCACGGGTTTCCACAGGACTCACAGACTGTTATTTTGCACAAGgaaaggagagagggggacacggggagaaaacagacacagcaaaataaagacaGTAGTCTCAGCTACAGCGCAGTGAACTGCAGCCCTCCTGGACATTcgggggagaaaataaaaaatacagacacaataaatataaaaataaacacactgaaaatacatatacTATGGAGAATGGGATTGGCCCGTCGGAGGAGTCCTGTGAAGTTAAGATCCAACCAGAGGGCAGCAGAACACATCACCGGACCAATGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136060 True 728 lncRNA 0.48 3 1328802 1332044

Neighbor

gene id symbol gene type direction distance location
AMCG00006278 nelfe coding downstream 28159 1298837 ~ 1300643 (-)
AMCG00006280 NA coding downstream 30832 1293396 ~ 1297970 (-)
AMCG00006273 NA coding downstream 67223 1248142 ~ 1261579 (-)
AMCG00006272 NA coding downstream 128808 1193270 ~ 1199994 (-)
AMCG00006271 NA coding downstream 137721 1181710 ~ 1191081 (-)
AMCG00006285 NA coding upstream 162316 1494360 ~ 1498054 (-)
AMCG00006283 NA coding upstream 218399 1550443 ~ 1555554 (-)
AMCG00006291 NA coding upstream 263628 1595672 ~ 1599457 (-)
AMCG00006290 NA coding upstream 346218 1678262 ~ 1683356 (-)
AMCG00006299 NA coding upstream 361199 1693243 ~ 1709505 (-)
G108750 NA non-coding downstream 7589 1320698 ~ 1321213 (-)
G108682 NA non-coding downstream 21922 1292038 ~ 1306880 (-)
G108717 NA non-coding downstream 127121 1180582 ~ 1201681 (-)
G108705 NA non-coding downstream 209104 1109651 ~ 1119698 (-)
G108689 NA non-coding downstream 227510 1040218 ~ 1101292 (-)
G108756 NA non-coding upstream 18041 1350085 ~ 1397331 (-)
G108760 NA non-coding upstream 73349 1405393 ~ 1409747 (-)
G108770 NA non-coding upstream 172154 1504198 ~ 1560390 (-)
G108772 NA non-coding upstream 204900 1536944 ~ 1542361 (-)
G108790 NA non-coding upstream 329709 1661753 ~ 1663033 (-)
AMCG00006274 zbtb12,LOC106570057,LOC106588515 other downstream 112618 1211286 ~ 1216184 (-)
AMCG00006266 NA other downstream 190850 1134901 ~ 1137952 (-)
G108708 NA other downstream 194112 1126562 ~ 1134690 (-)
AMCG00006247 NA other downstream 454308 838855 ~ 874494 (-)
AMCG00006245 LOC106569953,LOC106588396,LOC107101422,LOC107103722 other downstream 580066 726064 ~ 748736 (-)
AMCG00006277 prrt1,LOC108272790,LOC107694357 other upstream 5143 1337187 ~ 1341665 (-)
AMCG00006292 NA other upstream 12472 1344516 ~ 1637731 (-)
G108755 NA other upstream 18441 1350485 ~ 1554664 (-)
AMCG00006279 NA other upstream 26353 1358397 ~ 1510540 (-)
AMCG00006284 prrc2a other upstream 141434 1473478 ~ 1493970 (-)

Expression


Co-expression Network