G108755


Basic Information

Item Value
gene id G108755
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 1350485 ~ 1554664 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU136068
NCTAACAGCTCTCTGCACATAGACAGACTCAGGACACGGGACACTGGACAGTACACCTGTCATCAGTATGTCAATGGAAAGCATTATACATCTGGATTACCTGTTACTCTCTTCCTGCTCTCCATCTCTGTTAGTTCCAGTTCATCTGCGTGTCTGAGGGCCGGAGACAGACTCACTCTGAAGTGTGGGCTGGACTGTGGGGGGGGCGCTGGAAGCTGCTCTGAGACCCCACAGGGATTGACTCTGTCCTGGAGGGACGAGAGCGGAGTCCCACCGAAGGacgagagagacagatacagtATCACAGAGCTCAGGGGAGTCCACAGTCAACTCTCGGTGACACTGCGACAGTCAGACCACAACAAGAGCTGGACTTGTGTCCTGACAGAGCGAGGCGAGATGAAGACCTCTGAGTCCTACACCACTACACTCTCAGACGAGCTGTTCTCCACAGTGGGGCGGCTCCTGCTCCTGTCCTGTGTGGCTCCTGTCAGTCTGGGACCAGGAGAGACACTGCGGTGGACCTACAGACAATCTCGTACCAGCCAGGCCGTGGTGCTGTACAGCTTAAGATCCCTGACTGAAACGCCTCTGAAAGGGACAGTCCCACACAGTGGGAGAGCGGTGATGTCAGCCAACTCCTCACTGCTGATACACAATGTGCAGACGGGGGACGCTGGGCTGTACTGCTGTCAGAGAGACAAGGACTCTGGACCCAAAAAGACCCACAGGACGTTTGCTCTGAACACACTGT
>TU136071
NGCCTCAGTGACAGTGCCTTGTGACGGACTGACAGAATATCACAACTCCTATATATCCTGGGTGTTTAATCACAGATCCGAGACAACTGTAGAACTGAGCCGTGGTGGGATGATCACAGACACAGATCCAGACAGAGCTGGCAGACTGAGACTGGGGTCTAACAGCTCTCTGCACATAGACAGACTCAGGACACGGGACACTGGACAGTACAACTGTCATCAGTATGTCAATGGAAAGTATTATACATCTGGATTAACTGTTACTCTCTTCCTGCTCTCCATCTCTGTTAGTTCCAGTTCATCTGCGTGTCTGAGGGCCGGAGACAGACTCACTCTGAAGTGTGGGCTGGACTGTGGGGGGGGCGCTGGAAGCTGCTCTGAGACCCCACAGGGATTGACTCTGTCCTGGAGGGACGAGAGCGGAGTCCCACCGAAGGacgagagagacagatacagtATCACAGAGCTCAGGGGAGTCCACAGTCAACTCTCGGTGACACTGCGACAGTCAGACCACAACAAGAGCTGGACTTGTGTCCTGACAGAGCGAGGCGAGATGAAGACCTCTGAGTCCTACACCACTACACTCTCAGACGAGCTGTTCTCCACAGTGGGGCGGCTCCTGCTCCTGTCCTGTGTGGCTCCTGTCAGTCTGGGACCAGGAGAGACACTGCGGTGGACCTACAGACAATCTCGTACCAGCCAGGCCGTGGTGCTGTACAGCTTAAGATCCCTGACTGAAACGCCTCTGAAAGGGACAGTCCCACACAGTGGGAGAGCGGTGATGTCAGCCAACTCCTCACTGCTGATACACAATGTGCAGACGGGGGACGCTGGGCTGTACTGCTGTCAGAGAGACAAGGACTCTGGACCCAAAAAGACCCACAGGACGTTTGCTCTGAACACACTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136068 False 754 TUCP 0.55 3 1350485 1352941
TU136071 True 911 TUCP 0.54 3 1350485 1554664

Neighbor

gene id symbol gene type direction distance location
AMCG00006278 nelfe coding downstream 49842 1298837 ~ 1300643 (-)
AMCG00006280 NA coding downstream 52515 1293396 ~ 1297970 (-)
AMCG00006273 NA coding downstream 88906 1248142 ~ 1261579 (-)
AMCG00006272 NA coding downstream 150491 1193270 ~ 1199994 (-)
AMCG00006271 NA coding downstream 159404 1181710 ~ 1191081 (-)
AMCG00006291 NA coding upstream 41008 1595672 ~ 1599457 (-)
AMCG00006290 NA coding upstream 123598 1678262 ~ 1683356 (-)
AMCG00006299 NA coding upstream 138579 1693243 ~ 1709505 (-)
AMCG00006304 rps5,LOC106570065 coding upstream 253992 1808656 ~ 1818368 (-)
AMCG00006305 NA coding upstream 311895 1866559 ~ 1870731 (-)
G108752 NA non-coding downstream 18441 1328802 ~ 1332044 (-)
G108750 NA non-coding downstream 29272 1320698 ~ 1321213 (-)
G108682 NA non-coding downstream 43605 1292038 ~ 1306880 (-)
G108717 NA non-coding downstream 148804 1180582 ~ 1201681 (-)
G108705 NA non-coding downstream 230787 1109651 ~ 1119698 (-)
G108790 NA non-coding upstream 107089 1661753 ~ 1663033 (-)
G108791 NA non-coding upstream 110284 1664948 ~ 1670631 (-)
G108789 NA non-coding upstream 164965 1719629 ~ 1721131 (-)
G108805 NA non-coding upstream 179531 1734195 ~ 1783566 (-)
G108834 NA non-coding upstream 331301 1885965 ~ 1886276 (-)
AMCG00006277 prrt1,LOC108272790,LOC107694357 other downstream 8820 1337187 ~ 1341665 (-)
AMCG00006274 zbtb12,LOC106570057,LOC106588515 other downstream 134301 1211286 ~ 1216184 (-)
AMCG00006266 NA other downstream 212533 1134901 ~ 1137952 (-)
G108708 NA other downstream 215795 1126562 ~ 1134690 (-)
AMCG00006247 NA other downstream 475991 838855 ~ 874494 (-)
G108784 NA other upstream 91816 1646480 ~ 1660004 (-)
AMCG00006298 NA other upstream 167897 1722561 ~ 1724848 (-)
G108829 NA other upstream 326618 1881282 ~ 1881837 (-)
AMCG00006313 NA other upstream 465337 2020001 ~ 2024143 (-)
G108938 NA other upstream 543154 2097818 ~ 2130255 (-)

Expression


Co-expression Network