Gene
RNA
| Item | Value |
|---|---|
| gene id | G108772 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 1536944 ~ 1542361 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: rap guanine nucleotide exchange factor 2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU136091 | True | 304 | lncRNA | 0.59 | 2 | 1536944 | 1542361 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00006285 | NA | coding | downstream | 38890 | 1494360 ~ 1498054 (-) |
| AMCG00006278 | nelfe | coding | downstream | 236301 | 1298837 ~ 1300643 (-) |
| AMCG00006280 | NA | coding | downstream | 238974 | 1293396 ~ 1297970 (-) |
| AMCG00006273 | NA | coding | downstream | 275365 | 1248142 ~ 1261579 (-) |
| AMCG00006272 | NA | coding | downstream | 336950 | 1193270 ~ 1199994 (-) |
| AMCG00006283 | NA | coding | upstream | 8082 | 1550443 ~ 1555554 (-) |
| AMCG00006291 | NA | coding | upstream | 53311 | 1595672 ~ 1599457 (-) |
| AMCG00006290 | NA | coding | upstream | 135901 | 1678262 ~ 1683356 (-) |
| AMCG00006299 | NA | coding | upstream | 150882 | 1693243 ~ 1709505 (-) |
| AMCG00006304 | rps5,LOC106570065 | coding | upstream | 266295 | 1808656 ~ 1818368 (-) |
| G108760 | NA | non-coding | downstream | 127197 | 1405393 ~ 1409747 (-) |
| G108756 | NA | non-coding | downstream | 139613 | 1350085 ~ 1397331 (-) |
| G108752 | NA | non-coding | downstream | 204900 | 1328802 ~ 1332044 (-) |
| G108750 | NA | non-coding | downstream | 215731 | 1320698 ~ 1321213 (-) |
| G108682 | NA | non-coding | downstream | 230064 | 1292038 ~ 1306880 (-) |
| G108790 | NA | non-coding | upstream | 119392 | 1661753 ~ 1663033 (-) |
| G108791 | NA | non-coding | upstream | 122587 | 1664948 ~ 1670631 (-) |
| G108789 | NA | non-coding | upstream | 177268 | 1719629 ~ 1721131 (-) |
| G108805 | NA | non-coding | upstream | 191834 | 1734195 ~ 1783566 (-) |
| G108834 | NA | non-coding | upstream | 343604 | 1885965 ~ 1886276 (-) |
| AMCG00006279 | NA | other | downstream | 26404 | 1358397 ~ 1510540 (-) |
| AMCG00006284 | prrc2a | other | downstream | 42974 | 1473478 ~ 1493970 (-) |
| AMCG00006277 | prrt1,LOC108272790,LOC107694357 | other | downstream | 195279 | 1337187 ~ 1341665 (-) |
| AMCG00006274 | zbtb12,LOC106570057,LOC106588515 | other | downstream | 320760 | 1211286 ~ 1216184 (-) |
| AMCG00006266 | NA | other | downstream | 398992 | 1134901 ~ 1137952 (-) |
| G108784 | NA | other | upstream | 104119 | 1646480 ~ 1660004 (-) |
| AMCG00006298 | NA | other | upstream | 180200 | 1722561 ~ 1724848 (-) |
| G108829 | NA | other | upstream | 338921 | 1881282 ~ 1881837 (-) |
| AMCG00006313 | NA | other | upstream | 477640 | 2020001 ~ 2024143 (-) |
| G108938 | NA | other | upstream | 555457 | 2097818 ~ 2130255 (-) |
