G108789


Basic Information

Item Value
gene id G108789
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 1719629 ~ 1721131 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU136111
caCAATTCAAATAGTGCAGttcaattttattaaacatttttgtactTTCTGTTCATTTAAGCCCATTTGCACATGATTCCAAATCCAATtaactgacaaaaacaaacagaataaaataaaaggatatAAAACAGAATTCAGTCTAGAGATTTCAATTGGAGCCTCTGCTTAATTAAATTTCTTAAGTAGTTAATTATagctaatcaatcaatcagaacAGGCGATAGTGCAACTGATTGTGGATGACATCGAGAGGGCAAAGTGGGGAGACATGGAGTGACTGAGAGGAGAGagggatggagagcgGGGAGACCAAAAGAGAGGTATTGGGCAGGAGTagggagaagaggagaaagggagggagacaTAGGGgagaagaaaatgcaaatgaggCAGGGATAGAAAGAcagaaagtaaaagaaaaagatgccCCTCGAACATTCTTCCTGGCTGAGAGTTGTAACATGaacacataataaaaacaaaaaaacaacattagctagcccactatatatatacatatacgtatattttaaagttatatatttttctcttaaaaTTTAACATTGAAATTTCTGTGACTTGGTCCTGTAGCTCCCTGActgcacagtgacacacaggcCTGCTGCTCCACACACTGATCTTTCAACGCCTCTCGCCCAGtgatctacatttaaaaaattaactCCGCTAATGGGATTTGctctctgactgactgacacacagagacagacagactgattgACAGACAGAATTACTGACACTatctgactgatacactgactgactgactgaatttCAAAGTGTGTTAGACCTGCGTTGTGTCTGTATACACTGTGTAATAGTTCaatgatgtgtgtatgtgtgtgagagtgcaggctgtgcagtgtgtgtgtacagtgtgtgaatGCAATGGGTTGGGTTAGGTTGTGTAAGTCCGTACAGTGTGAGTATTACTACTGTACTtgtcctgcagtgtgtgtttttgtaagtgTGTGTTTACTTAAACATTTGCGCCTTTAGGATGCGTGTGTGTACAAGTGTGTGTCTACTTCATGTAACCGTGTCTCTGTGAGtattacagtgtgttacagtgtctgtgtACTGCAGTATCcgaatgtgtgaatgtgtgtgataGTATCCCCCCTTTCTCTGAGCCTCTCTCTACCAGACGGTGAGCCGTGTGTGCATTAtagtgagtttgtgtgtgtgtgtgtgtgtgtgtctctctctctctcccgtctTCCCTTGTGagtttttaatacagtatttctCTTTCCCCCATCAATCACCACCCCTCTACCGGAGGGCGCGGGCCACAGAGGCGTAGGCACTGTGCACCTCGGTGTCGGCGGGGCAGGTGGAGGCGAACTCCTCACGGGCATAGGCTGCGTCCAGGTATCGCCACAGCGACACAAGCGAGCGCGGGATCTCGAACCCACGGTACTTCAGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136111 True 1455 lncRNA 0.44 2 1719629 1721131

Neighbor

gene id symbol gene type direction distance location
AMCG00006299 NA coding downstream 10124 1693243 ~ 1709505 (-)
AMCG00006290 NA coding downstream 36273 1678262 ~ 1683356 (-)
AMCG00006291 NA coding downstream 120172 1595672 ~ 1599457 (-)
AMCG00006283 NA coding downstream 164075 1550443 ~ 1555554 (-)
AMCG00006285 NA coding downstream 221575 1494360 ~ 1498054 (-)
AMCG00006304 rps5,LOC106570065 coding upstream 87525 1808656 ~ 1818368 (-)
AMCG00006305 NA coding upstream 145428 1866559 ~ 1870731 (-)
AMCG00006307 NA coding upstream 209503 1930634 ~ 1932402 (-)
AMCG00006314 NA coding upstream 270171 1991302 ~ 1999290 (-)
AMCG00006315 NA coding upstream 290231 2011362 ~ 2016934 (-)
G108791 NA non-coding downstream 48998 1664948 ~ 1670631 (-)
G108790 NA non-coding downstream 56596 1661753 ~ 1663033 (-)
G108770 NA non-coding downstream 159239 1504198 ~ 1560390 (-)
G108772 NA non-coding downstream 177268 1536944 ~ 1542361 (-)
G108760 NA non-coding downstream 309882 1405393 ~ 1409747 (-)
G108805 NA non-coding upstream 13064 1734195 ~ 1783566 (-)
G108834 NA non-coding upstream 164834 1885965 ~ 1886276 (-)
G108948 NA non-coding upstream 331860 2052991 ~ 2057622 (-)
G109090 NA non-coding upstream 625391 2346522 ~ 2390552 (-)
G109091 LOC103376870 non-coding upstream 629623 2350754 ~ 2356238 (-)
G108784 NA other downstream 59625 1646480 ~ 1660004 (-)
AMCG00006292 NA other downstream 81898 1344516 ~ 1637731 (-)
AMCG00006298 NA other upstream 1430 1722561 ~ 1724848 (-)
G108829 NA other upstream 160151 1881282 ~ 1881837 (-)
AMCG00006313 NA other upstream 298870 2020001 ~ 2024143 (-)
G108938 NA other upstream 376687 2097818 ~ 2130255 (-)
AMCG00006328 NA other upstream 603000 2324131 ~ 2329991 (-)

Expression


Co-expression Network