G108831


Basic Information

Item Value
gene id G108831
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 1889527 ~ 1890035 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU136167
AAACGAAAGCCGAACGCAAACAAAGGACTGCAGTGAATATGGcgatttatttctttatttgattggacaataaaaatacaaagtggGGTGTGTAATACTAAAACCTTTACTTCCCAAATACGGTAAAAGCGATAAgggtttgtattattattattattattagtagtagtagtagtcggCATTGTGTGTGCAATGCAGTGGATAGCTGCTCTCCGGTGTGTCCACTCGGTGTCCATCGCTGTGTTCCTGCTGTCCTGAGAGACGCCGCTGCGTGAGTACCTGTGTGAGCCGCACTGGGGTGTCTATAGGCGTGTGTTGGTAAGGGGGAGGTCCAgcacctccgtgaagttggcaccccatataattaaataatcaccaaaactattccattcatttgagctgtgtttgtgctgatttgtgccgCAAAATGAACATTTCTGCTGGTTTGGTTTTCAAGATATTAAGCATTCTTTTTTGGGCtgtgtgacgtcactctccaccccatctcG

Function

NR:

description
PREDICTED: glutamate receptor ionotropic, kainate 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136167 True 509 lncRNA 0.44 1 1889527 1890035

Neighbor

gene id symbol gene type direction distance location
AMCG00006303 NA coding upstream 1957 1883754 ~ 1887570 (+)
AMCG00006301 NA coding upstream 9447 1877557 ~ 1880080 (+)
AMCG00006306 NA coding upstream 24221 1860979 ~ 1865306 (+)
AMCG00006300 NA coding upstream 83487 1805301 ~ 1806040 (+)
AMCG00006302 NA coding upstream 95612 1764374 ~ 1793915 (+)
AMCG00006308 NA coding downstream 6470 1896505 ~ 1908086 (+)
AMCG00006309 NA coding downstream 151981 2042016 ~ 2045884 (+)
AMCG00006311 NA coding downstream 170164 2060199 ~ 2068535 (+)
AMCG00006312 ppt2,LOC107086175,LOC101072178 coding downstream 178715 2068750 ~ 2073323 (+)
AMCG00006310 NA coding downstream 190497 2080532 ~ 2089002 (+)
G108632 NA non-coding upstream 238068 1651055 ~ 1651459 (+)
G108587 NA non-coding upstream 334862 1352818 ~ 1554665 (+)
G108605 NA non-coding upstream 393819 1494364 ~ 1495708 (+)
G108602 NA non-coding upstream 401657 1487312 ~ 1487870 (+)
G108595 NA non-coding upstream 414560 1473372 ~ 1474967 (+)
G108832 NA non-coding downstream 1001 1891036 ~ 1892425 (+)
G108833 NA non-coding downstream 2828 1892863 ~ 1893487 (+)
G108847 NA non-coding downstream 62179 1952214 ~ 1953042 (+)
G108854 NA non-coding downstream 101580 1991615 ~ 2011808 (+)
G108856 NA non-coding downstream 118052 2008087 ~ 2033572 (+)
G108626 rps5,LOC107086176 other upstream 74917 1637397 ~ 1814610 (+)
AMCG00006294 NA other upstream 148191 1735932 ~ 1741336 (+)
G108585 NA other upstream 459540 1350383 ~ 1429987 (+)
AMCG00006275 NA other upstream 573969 1286829 ~ 1315558 (+)
AMCG00006276 NA other upstream 603475 1278460 ~ 1286052 (+)
AMCG00006366 NA other downstream 1352902 3242937 ~ 3252080 (+)
AMCG00006368 NA other downstream 1384747 3274782 ~ 3286179 (+)
G109309 NA other downstream 1471319 3361354 ~ 3365565 (+)
G109362 NA other downstream 1613146 3503181 ~ 3506679 (+)
AMCG00006379 NA other downstream 1680004 3570039 ~ 3621796 (+)

Expression


Co-expression Network