G108914


Basic Information

Item Value
gene id G108914
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 2259942 ~ 2262497 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU136264
gagGAGAGGCGCAATATCACCCAGAGCCCCGGTGAGACGAGCTGCCTGCTGCCGCTCTGGGTGACTCCGGTCTCGGCTCTGCTCTGCGCGCTGCTCGCCGCTGTCTGCGGATTCTGCCTGGGCCACAGACCAGTTTTCAAAGACTCGCAAGACTCCAACACGAGAGGTAATCAGAGGAGAAAGGAAGACTGTGATCAGAAAGAAGACGGAGGTTTGAACTACGCTACACTAGAGATACGGGAAAACCCACAACGCGCCAAGAAACAAGAAACCAATGAGGAGTTTTGTTCATATTCAGAGGTTTACCCGAGTAGATGcaagtaaaataacaaattgaactgatacattccttttttaataatataaatatat

Function

NR:

description
PREDICTED: LIM and calponin homology domains-containing protein 1 isoform X6

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136264 True 372 lncRNA 0.48 3 2259942 2262497

Neighbor

gene id symbol gene type direction distance location
AMCG00006323 NA coding upstream 53971 2204897 ~ 2205971 (+)
AMCG00006324 NA coding upstream 67057 2191525 ~ 2192885 (+)
AMCG00006318 NA coding upstream 88568 2154397 ~ 2171374 (+)
AMCG00006317 NA coding upstream 122241 2134356 ~ 2137701 (+)
AMCG00006310 NA coding upstream 170940 2080532 ~ 2089002 (+)
AMCG00006327 NA coding downstream 103795 2366292 ~ 2371085 (+)
AMCG00006330 NA coding downstream 129222 2391719 ~ 2396364 (+)
AMCG00006334 NA coding downstream 265734 2528231 ~ 2539840 (+)
AMCG00006337 NA coding downstream 326887 2589384 ~ 2594077 (+)
AMCG00006338 NA coding downstream 336757 2599254 ~ 2605484 (+)
G108890 NA non-coding upstream 7596 2159977 ~ 2252346 (+)
G108884 NA non-coding upstream 129679 2128318 ~ 2130263 (+)
G108878 NA non-coding upstream 131942 2098349 ~ 2128000 (+)
G108856 NA non-coding upstream 226370 2008087 ~ 2033572 (+)
G108854 NA non-coding upstream 248134 1991615 ~ 2011808 (+)
G108987 NA non-coding downstream 30200 2292697 ~ 2292896 (+)
G109004 LOC103376870 non-coding downstream 88257 2350754 ~ 2356238 (+)
G109010 NA non-coding downstream 140406 2402903 ~ 2403151 (+)
G109011 LOC100846954 non-coding downstream 173561 2436058 ~ 2518534 (+)
G109217 NA non-coding downstream 742359 3004856 ~ 3028646 (+)
G108626 rps5,LOC107086176 other upstream 445332 1637397 ~ 1814610 (+)
AMCG00006294 NA other upstream 518606 1735932 ~ 1741336 (+)
G108585 NA other upstream 829955 1350383 ~ 1429987 (+)
AMCG00006275 NA other upstream 944384 1286829 ~ 1315558 (+)
AMCG00006276 NA other upstream 973890 1278460 ~ 1286052 (+)
AMCG00006366 NA other downstream 980440 3242937 ~ 3252080 (+)
AMCG00006368 NA other downstream 1012285 3274782 ~ 3286179 (+)
G109309 NA other downstream 1098857 3361354 ~ 3365565 (+)
G109362 NA other downstream 1240684 3503181 ~ 3506679 (+)
AMCG00006379 NA other downstream 1307542 3570039 ~ 3621796 (+)

Expression


Co-expression Network