G108948



Basic Information


Item Value
gene id G108948
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 2052991 ~ 2057622 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU136316
attaacactgactgactggacactacagtacattaacactgactgactgactggacactacagtacattaacactgactgactgactggacactacagcacattaacactgactgactgactggacactacagcacattaacactgactgactggacactacagcacattaacactgactgactggacactacagcacattaacactgactgactgactggacactacagtacattaacactgactgactgactggacactacagtacattaacactgactgactggacactacagcacattaacactgactgactggacactacagcacattaacactgactgactggacactgcagcacattaacactgactgactggacactacagcacattaacactgacagacagaatGACTCCGCCACCCCACTCACCCTCCTACGCCCGCCTCTCTGTGTGACCAGGCAGGACCTGTCCAGGCACATGTAGCCCCCGATCACCTCGATCTCCTCCGCAGTGGGGTACCTCTTCTTGCCCTTCGTGGAGTCCCCTGCCCCCCCGGCACCGTCCGCCCTGGCTGCCTGGCCCCCGGGGGCAGGGGGCAGCCCGTTGGGGAGTCCTGCCTGCGAGGGGGAGGacggggaggtgggggtggcTTTGGCCCCTCCGGCTGACGGCCCCATCTTCCTGGGGTTGATGGTGAT

Function


GO:

id name namespace
GO:0051128 regulation of cellular component organization biological_process

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU136316 True 703 lncRNA 0.55 2 2052991 2057622

Neighbor


gene id symbol gene type direction distance location
AMCG00006316 NA coding downstream 18756 2027136 ~ 2034235 (-)
AMCG00006315 NA coding downstream 36057 2011362 ~ 2016934 (-)
AMCG00006314 NA coding downstream 53701 1991302 ~ 1999290 (-)
AMCG00006307 NA coding downstream 120589 1930634 ~ 1932402 (-)
AMCG00006305 NA coding downstream 182260 1866559 ~ 1870731 (-)
AMCG00006320 NA coding upstream 39951 2097573 ~ 2099149 (-)
AMCG00006322 NA coding upstream 41545 2099167 ~ 2102889 (-)
AMCG00006321 NA coding upstream 66750 2124372 ~ 2128938 (-)
AMCG00006319 NA coding upstream 79202 2136824 ~ 2140157 (-)
AMCG00006325 NA coding upstream 148985 2206607 ~ 2208884 (-)
G108834 NA non-coding downstream 166715 1885965 ~ 1886276 (-)
G108805 NA non-coding downstream 269425 1734195 ~ 1783566 (-)
G108789 NA non-coding downstream 331860 1719629 ~ 1721131 (-)
G108791 NA non-coding downstream 382360 1664948 ~ 1670631 (-)
G108790 NA non-coding downstream 389958 1661753 ~ 1663033 (-)
G109090 NA non-coding upstream 288900 2346522 ~ 2390552 (-)
G109091 LOC103376870 non-coding upstream 293132 2350754 ~ 2356238 (-)
G109099 NA non-coding upstream 337127 2394749 ~ 2397990 (-)
G109163 NA non-coding upstream 760847 2818469 ~ 2832329 (-)
G109294 NA non-coding upstream 1228648 3286270 ~ 3287229 (-)
AMCG00006313 NA other downstream 28848 2020001 ~ 2024143 (-)
G108829 NA other downstream 171154 1881282 ~ 1881837 (-)
AMCG00006298 NA other downstream 328143 1722561 ~ 1724848 (-)
G108784 NA other downstream 392987 1646480 ~ 1660004 (-)
AMCG00006279 NA other downstream 542451 1358397 ~ 1510540 (-)
G108938 NA other upstream 40196 2097818 ~ 2130255 (-)
AMCG00006328 NA other upstream 266509 2324131 ~ 2329991 (-)
AMCG00006344 NA other upstream 523715 2581337 ~ 2586846 (-)
AMCG00006354 NA other upstream 830864 2888486 ~ 2894534 (-)
AMCG00006390 NA other upstream 1641263 3698885 ~ 3728519 (-)

Expression



Co-expression Network