G109004 (LOC103376870)


Basic Information

Item Value
gene id G109004
gene name LOC103376870
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 2350754 ~ 2356238 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU136392
CTCACCAAAATTGGACagttgaagactggaaaaatgttgccttgTCTCGATTTCTGTTGAGACATTCAGATGGTAGAGTCAGAATTTGGCgtaaacagaatgagaacatggatccatcatgccttgttaccactgtgcaggctggtggtggtggtgtaatggtgtgggggatgttttcttggcacactttaggccccttagtgccaattgggcattgtttaaatgccacggcctacctgagcattgtttctgaccatgtccatccctttatgaccaccatgtacccatcctctgacacaaacacagtattagtatggtgttcctaataatcctttaggtgagtgtatac

Function

NR:

description
PREDICTED: uncharacterized protein LOC103376870

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136392 True 349 lncRNA 0.45 2 2350754 2356238

Neighbor

gene id symbol gene type direction distance location
AMCG00006323 NA coding upstream 144783 2204897 ~ 2205971 (+)
AMCG00006324 NA coding upstream 157869 2191525 ~ 2192885 (+)
AMCG00006318 NA coding upstream 179380 2154397 ~ 2171374 (+)
AMCG00006317 NA coding upstream 213053 2134356 ~ 2137701 (+)
AMCG00006310 NA coding upstream 261752 2080532 ~ 2089002 (+)
AMCG00006327 NA coding downstream 10054 2366292 ~ 2371085 (+)
AMCG00006330 NA coding downstream 35481 2391719 ~ 2396364 (+)
AMCG00006334 NA coding downstream 171993 2528231 ~ 2539840 (+)
AMCG00006337 NA coding downstream 233146 2589384 ~ 2594077 (+)
AMCG00006338 NA coding downstream 243016 2599254 ~ 2605484 (+)
G108987 NA non-coding upstream 57858 2292697 ~ 2292896 (+)
G108889 NA non-coding upstream 61299 2250567 ~ 2289455 (+)
G108914 NA non-coding upstream 88257 2259942 ~ 2262497 (+)
G108890 NA non-coding upstream 98408 2159977 ~ 2252346 (+)
G108884 NA non-coding upstream 220491 2128318 ~ 2130263 (+)
G109010 NA non-coding downstream 46665 2402903 ~ 2403151 (+)
G109011 LOC100846954 non-coding downstream 79820 2436058 ~ 2518534 (+)
G109217 NA non-coding downstream 648618 3004856 ~ 3028646 (+)
G109218 NA non-coding downstream 660541 3016779 ~ 3069228 (+)
G109260 NA non-coding downstream 878667 3234905 ~ 3236401 (+)
G108626 rps5,LOC107086176 other upstream 536144 1637397 ~ 1814610 (+)
AMCG00006294 NA other upstream 609418 1735932 ~ 1741336 (+)
G108585 NA other upstream 920767 1350383 ~ 1429987 (+)
AMCG00006275 NA other upstream 1035196 1286829 ~ 1315558 (+)
AMCG00006276 NA other upstream 1064702 1278460 ~ 1286052 (+)
AMCG00006366 NA other downstream 886699 3242937 ~ 3252080 (+)
AMCG00006368 NA other downstream 918544 3274782 ~ 3286179 (+)
G109309 NA other downstream 1005116 3361354 ~ 3365565 (+)
G109362 NA other downstream 1146943 3503181 ~ 3506679 (+)
AMCG00006379 NA other downstream 1213801 3570039 ~ 3621796 (+)

Expression


Co-expression Network