G109010


Basic Information

Item Value
gene id G109010
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 2402903 ~ 2403151 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU136402
CACCActgaacacctttgggatgaattggaatgcagtctgtgagccaggcctgatcacccaacatcagtgcccgacctcactgatgctcttgtggctgaatggaagcaaatccagCAAtattccaacatctagtggaaagccttaacagaagagtggaggctgttatagcagcaaaggggggaccaactcaaTATTAAGttcaaattagattttaatgCGATACAAATAGTATAAACAGTAATGCTGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136402 True 249 lncRNA 0.44 1 2402903 2403151

Neighbor

gene id symbol gene type direction distance location
AMCG00006330 NA coding upstream 6539 2391719 ~ 2396364 (+)
AMCG00006327 NA coding upstream 31818 2366292 ~ 2371085 (+)
AMCG00006323 NA coding upstream 196932 2204897 ~ 2205971 (+)
AMCG00006324 NA coding upstream 210018 2191525 ~ 2192885 (+)
AMCG00006318 NA coding upstream 231529 2154397 ~ 2171374 (+)
AMCG00006334 NA coding downstream 125080 2528231 ~ 2539840 (+)
AMCG00006337 NA coding downstream 186233 2589384 ~ 2594077 (+)
AMCG00006338 NA coding downstream 196103 2599254 ~ 2605484 (+)
AMCG00006335 abcf1,LOC107745711,LOC107687077 coding downstream 209941 2613092 ~ 2625633 (+)
AMCG00006336 ppp1r10 coding downstream 238261 2641412 ~ 2649109 (+)
G109004 LOC103376870 non-coding upstream 46665 2350754 ~ 2356238 (+)
G108987 NA non-coding upstream 110007 2292697 ~ 2292896 (+)
G108889 NA non-coding upstream 113448 2250567 ~ 2289455 (+)
G108914 NA non-coding upstream 140406 2259942 ~ 2262497 (+)
G108890 NA non-coding upstream 150557 2159977 ~ 2252346 (+)
G109011 LOC100846954 non-coding downstream 32907 2436058 ~ 2518534 (+)
G109217 NA non-coding downstream 601705 3004856 ~ 3028646 (+)
G109218 NA non-coding downstream 613628 3016779 ~ 3069228 (+)
G109260 NA non-coding downstream 831754 3234905 ~ 3236401 (+)
G109301 LOC103376870 non-coding downstream 936938 3340089 ~ 3393931 (+)
G108626 rps5,LOC107086176 other upstream 588293 1637397 ~ 1814610 (+)
AMCG00006294 NA other upstream 661567 1735932 ~ 1741336 (+)
G108585 NA other upstream 972916 1350383 ~ 1429987 (+)
AMCG00006275 NA other upstream 1087345 1286829 ~ 1315558 (+)
AMCG00006276 NA other upstream 1116851 1278460 ~ 1286052 (+)
AMCG00006366 NA other downstream 839786 3242937 ~ 3252080 (+)
AMCG00006368 NA other downstream 871631 3274782 ~ 3286179 (+)
G109309 NA other downstream 958203 3361354 ~ 3365565 (+)
G109362 NA other downstream 1100030 3503181 ~ 3506679 (+)
AMCG00006379 NA other downstream 1166888 3570039 ~ 3621796 (+)

Expression


Co-expression Network