G109091 (LOC103376870)


Basic Information

Item Value
gene id G109091
gene name LOC103376870
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 2350754 ~ 2356238 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU136517
gtatacactcacctaaaggattattaggaacaccatactaatactgtgtttgtgtcagaggatgggtacatggtggtcataaagggatggacatggtcagaaacaatgctcaggtaggccgtggcatttaaacaatgcccaattggcactaaggggcctaaagtgtgccaagaaaacatcccccacaccattacaccaccaccaccagcctgcacagtggtaacaaggcatgatggatccatgttctcattctgtttacGCCAAATTCTGACTCTACCATCTGAATGTCTCAACAGAAATCGAGAcagatcagaccaggcaacatttttccagtcttcaactGTCCAATTTTGGTGAG
>TU136519
gtatacactcacctaaaggattattaggaacaccatactaatactgtgtttgtgtcagaggatgggtacatggtggtcataaagggatggacatggtcagaaacaatgctcaggtaggccgtggcatttaaacaatgcccaattggcactaaggggcctaaagtgtgccaagaaaacatcccccacaccattacaccaccaccaccagcctgcacagtggtaacaaggcatgatggatccatgttctcattctgtttacGCCAAATTCTGACTCTACCATCTaccaggcaacatttttccagtcttcaactGTCCAATTTTGGTGAG
>TU136520
gtatacactcacctaaaggattattaggaacaccatactaatactgtgtttgtgtcagaggatgggtacatggtggtcataaagggatggacatggtcagaaacaatgctcaggtaggccgtggcatttaaacaatgcccaattggcactaaggggcctaaagtgtgccaagaaaacatcccccacaccattacaccaccaccaccagcctgcacagtggtaacaaggcatgatggatccatgttctcattctgtttacGCCAAATTCTGACTCTACCATCTGAATGTCTCAACAGAAatcagaccaggcaacatttttccagtcttcaactGTCCAATTTTGGTGAG

Function

NR:

description
PREDICTED: uncharacterized protein LOC103376870

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136517 True 358 lncRNA 0.45 2 2350754 2356238
TU136519 False 327 lncRNA 0.45 2 2350754 2356238
TU136520 False 348 lncRNA 0.45 2 2350754 2356238

Neighbor

gene id symbol gene type direction distance location
AMCG00006329 NA coding downstream 50230 2278147 ~ 2300524 (-)
AMCG00006326 NA coding downstream 95838 2218031 ~ 2254916 (-)
AMCG00006325 NA coding downstream 141870 2206607 ~ 2208884 (-)
AMCG00006319 NA coding downstream 210597 2136824 ~ 2140157 (-)
AMCG00006321 NA coding downstream 221816 2124372 ~ 2128938 (-)
AMCG00006331 NA coding upstream 47317 2403555 ~ 2413961 (-)
AMCG00006332 NA coding upstream 184032 2540270 ~ 2550180 (-)
AMCG00006333 NA coding upstream 202637 2558875 ~ 2561435 (-)
AMCG00006340 NA coding upstream 219423 2575661 ~ 2579656 (-)
AMCG00006342 NA coding upstream 249984 2606222 ~ 2609426 (-)
G108948 NA non-coding downstream 293132 2052991 ~ 2057622 (-)
G108834 NA non-coding downstream 464478 1885965 ~ 1886276 (-)
G108805 NA non-coding downstream 567188 1734195 ~ 1783566 (-)
G108789 NA non-coding downstream 629623 1719629 ~ 1721131 (-)
G108791 NA non-coding downstream 680123 1664948 ~ 1670631 (-)
G109099 NA non-coding upstream 38511 2394749 ~ 2397990 (-)
G109163 NA non-coding upstream 462231 2818469 ~ 2832329 (-)
G109294 NA non-coding upstream 930032 3286270 ~ 3287229 (-)
G109322 LOC103376870 non-coding upstream 983880 3340118 ~ 3433270 (-)
G109334 NA non-coding upstream 1010959 3367197 ~ 3369548 (-)
AMCG00006328 NA other downstream 20763 2324131 ~ 2329991 (-)
G108938 NA other downstream 220499 2097818 ~ 2130255 (-)
AMCG00006313 NA other downstream 326611 2020001 ~ 2024143 (-)
G108829 NA other downstream 468917 1881282 ~ 1881837 (-)
AMCG00006298 NA other downstream 625906 1722561 ~ 1724848 (-)
AMCG00006344 NA other upstream 225099 2581337 ~ 2586846 (-)
AMCG00006354 NA other upstream 532248 2888486 ~ 2894534 (-)
AMCG00006390 NA other upstream 1342647 3698885 ~ 3728519 (-)
AMCG00006398 NA other upstream 1373804 3730042 ~ 3815517 (-)
AMCG00006414 NA other upstream 1796578 4152816 ~ 4158123 (-)

Expression


Co-expression Network