G109163


Basic Information

Item Value
gene id G109163
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 2818469 ~ 2832329 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU136621
GTTCCTGTCTGTGAAGCACAGCCAAGAAGCACAGAAGTGTGAACGGCCACTGCGAAACGAAAGTTGTGTTGAAGGAGAAGAGACAATACAAGACCGAGCAGgaggaagaaaagagagagggagagagagagagagacacaccgctgCCTGCCTGACCCAGACTAACCTAAGCTGTCCTGTGGGGAGAAAGGAGAAAtcgggtattatctgtttctttctgtaatgcAGCAGAaacttaatattacttattttcagtaacatcattgaatgatattagtttcctatttttgtcataaataaataattattgcacATCTCTGACTTGACcacatcttccctctaaaaagaatcttaaaagagaaaccaattgactatgagttttcagttcaactttttatttagattgactgaaaaaccaagcatatcaaattctcttacaaggtgaaatgcaatgtttaattgtattgccAGTACAGCTGAGGTCTGTTGAGGTTGGTTGAGTGATTGCCCCAGCACAAGGTTTCTATATAACTCCCAAAGGAGTGAGTGAGAAGGGGATAAAAGAGTGAAATGGACAACAAAGGggtttcctttttgttttgcagaactGCCAATAGCGTGGCGCTCCAGCCCTGGTTGTCATGGCACTCTGGGGGATGGAGAAGGAGCGGGTCATTAATAGGAAGTGAAGTCATTAAGGACATTTGCACATGTTCGTGATGGATGGACGTTGTAAGGGATGGgatgtgcatttatttcatATCAACTGTGAGAGTTGGGGAGGGATTGAGCAGTTTGTGATATGGggggatttaaatgtttaagcttttgtagttttaaaagtaaattagcCTGGGTTGGTAaaggctttgttttaattagtatctaatactaatactaattagTATTAGTAACTCATTAATTTCTAACTAATGGGGGGTGAAAGCTGTCCTGTCCCTGTGTATTGTTATTGCAATAAATGTTGTCAAATGTTGAACTGGCTCTCTTCATGTTGGATGTCCGATGTACCGGACCTGTGAAGGGGGCTAGGAATAGAGGGTGCGCTGCTGAGGTTATTGTCCTCATTACCAAAAGAAACAAGGTGGCGTGGTCGGTTGTGGGGTTTGTGACGTGGGTGGGTTCTAGTGGGGAATTCCCCCGGGACCCCCTGTCACATctaatctttgttttttatttttgtttctgtgaaatCATGGAATCCTTTTTGTTCAATAATGTTTTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136621 True 1244 lncRNA 0.41 2 2818469 2832329

Neighbor

gene id symbol gene type direction distance location
AMCG00006341 NA coding downstream 158967 2650628 ~ 2659502 (-)
AMCG00006343 NA coding downstream 186762 2628495 ~ 2631707 (-)
AMCG00006342 NA coding downstream 209043 2606222 ~ 2609426 (-)
AMCG00006340 NA coding downstream 238813 2575661 ~ 2579656 (-)
AMCG00006333 NA coding downstream 257034 2558875 ~ 2561435 (-)
AMCG00006357 NA coding upstream 131986 2964315 ~ 2964962 (-)
AMCG00006355 NA coding upstream 133489 2965818 ~ 2970452 (-)
AMCG00006356 NA coding upstream 142368 2974697 ~ 2982807 (-)
AMCG00006361 NA coding upstream 280214 3112543 ~ 3117675 (-)
AMCG00006363 NA coding upstream 287948 3120277 ~ 3124200 (-)
G109099 NA non-coding downstream 420479 2394749 ~ 2397990 (-)
G109090 NA non-coding downstream 427917 2346522 ~ 2390552 (-)
G109091 LOC103376870 non-coding downstream 462231 2350754 ~ 2356238 (-)
G108948 NA non-coding downstream 760847 2052991 ~ 2057622 (-)
G108834 NA non-coding downstream 932193 1885965 ~ 1886276 (-)
G109294 NA non-coding upstream 453941 3286270 ~ 3287229 (-)
G109322 LOC103376870 non-coding upstream 507789 3340118 ~ 3433270 (-)
G109334 NA non-coding upstream 534868 3367197 ~ 3369548 (-)
G109432 NA non-coding upstream 716285 3548614 ~ 3561944 (-)
G109439 NA non-coding upstream 754267 3586596 ~ 3655123 (-)
AMCG00006344 NA other downstream 231623 2581337 ~ 2586846 (-)
AMCG00006328 NA other downstream 488478 2324131 ~ 2329991 (-)
G108938 NA other downstream 688214 2097818 ~ 2130255 (-)
AMCG00006313 NA other downstream 794326 2020001 ~ 2024143 (-)
G108829 NA other downstream 936632 1881282 ~ 1881837 (-)
AMCG00006354 NA other upstream 56157 2888486 ~ 2894534 (-)
AMCG00006390 NA other upstream 866556 3698885 ~ 3728519 (-)
AMCG00006398 NA other upstream 897713 3730042 ~ 3815517 (-)
AMCG00006414 NA other upstream 1320487 4152816 ~ 4158123 (-)
G109633 NA other upstream 1332605 4164934 ~ 4165600 (-)

Expression


Co-expression Network