G109217


Basic Information

Item Value
gene id G109217
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 3004856 ~ 3028646 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU136687
gccaatcagcagtcCCCTCCGCCCACTGCGGTCCAGTGATGTGGGGGACGACACTGACTGATAGACTCTGGCAGGGCTGTCACTCAGCCACGTGTAAAGGGTGTTCAGCTGCACACTAGTCTATAGTTGAATTAAGAGTAGCGGTGtctgcagtccagtcctgtctgtctgtctgtctctgtctggcAGGAAGTCCTGGGAACCCCCGGAGAGAGAACTGCAACAGCCCTCTGTCCTGGAGTATCAGACTGACTCTCACCGCCGTCTTCAGCATCATGGTCACAGCGCTGCTGTACAGAGCGCACCGAGACCACATCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136687 True 320 lncRNA 0.57 2 3004856 3028646

Neighbor

gene id symbol gene type direction distance location
AMCG00006359 NA coding upstream 3566 2989143 ~ 3001290 (+)
AMCG00006353 NA coding upstream 44324 2955335 ~ 2960532 (+)
AMCG00006352 NA coding upstream 60384 2936943 ~ 2944472 (+)
AMCG00006358 NA coding upstream 70295 2908172 ~ 2934561 (+)
AMCG00006347 NA coding upstream 122639 2866303 ~ 2882217 (+)
AMCG00006360 NA coding downstream 65436 3094082 ~ 3111575 (+)
AMCG00006364 NA coding downstream 122426 3151072 ~ 3177539 (+)
AMCG00006367 NA coding downstream 191573 3220219 ~ 3232977 (+)
AMCG00006370 NA coding downstream 264097 3292743 ~ 3301359 (+)
AMCG00006373 NA coding downstream 313893 3342539 ~ 3349221 (+)
G109011 LOC100846954 non-coding upstream 486322 2436058 ~ 2518534 (+)
G109010 NA non-coding upstream 601705 2402903 ~ 2403151 (+)
G109004 LOC103376870 non-coding upstream 648618 2350754 ~ 2356238 (+)
G108987 NA non-coding upstream 711960 2292697 ~ 2292896 (+)
G108889 NA non-coding upstream 715401 2250567 ~ 2289455 (+)
G109260 NA non-coding downstream 206259 3234905 ~ 3236401 (+)
G109301 LOC103376870 non-coding downstream 311443 3340089 ~ 3393931 (+)
G109389 NA non-coding downstream 519968 3548614 ~ 3548988 (+)
G109405 NA non-coding downstream 670462 3699108 ~ 3714779 (+)
G109392 NA non-coding downstream 693873 3722519 ~ 3755041 (+)
G108626 rps5,LOC107086176 other upstream 1190246 1637397 ~ 1814610 (+)
AMCG00006294 NA other upstream 1263520 1735932 ~ 1741336 (+)
G108585 NA other upstream 1574869 1350383 ~ 1429987 (+)
AMCG00006275 NA other upstream 1689298 1286829 ~ 1315558 (+)
AMCG00006276 NA other upstream 1718804 1278460 ~ 1286052 (+)
AMCG00006366 NA other downstream 214291 3242937 ~ 3252080 (+)
AMCG00006368 NA other downstream 246136 3274782 ~ 3286179 (+)
G109309 NA other downstream 332708 3361354 ~ 3365565 (+)
G109362 NA other downstream 474535 3503181 ~ 3506679 (+)
AMCG00006379 NA other downstream 541393 3570039 ~ 3621796 (+)

Expression


Co-expression Network