G109301 (LOC103376870)


Basic Information

Item Value
gene id G109301
gene name LOC103376870
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 3340089 ~ 3393931 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU136826
CCTTAGTGCCAATTGGGCATCATTTAAATGCCATggcctacctgagcattgtttctgaccatgtccatccctttatgaccaccatgtacccatcctctgatggctacttccagcagaataatgcaccatgtcacaaaggttgaatcatttcaaattggtttcttgaacatgacaatgagttcactgtactaaactggcccccacagtcaccagatctcaacccaatagagcatctttgggatgtggtggaacgggagcttcgtgctctggatgtgcatcccacaaatctccatcaactgcaagatgctatcctatcaatatgggccaacatttctaaagaatgctttcagcaccttgttgaatcaatgccacgtagaattaaggcagttctgaaggcgaaagggggtcaaacacagtattagtatggtgttcctaataatcctttaggtgagtgtatattaaaaagaaaatactggaatatcataattggataagtctccaccccgaGTTGGAAGCACCTTTAGCAGTAATTACAGCGGGAAGTCTGTGGGGATCGGTCtgtaccaggtttgcacacctagatttggcaatatttgaccgttcttctttaaaaaactgc

Function

NR:

description
PREDICTED: uncharacterized protein LOC103376870

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136826 True 619 lncRNA 0.43 2 3340089 3393931

Neighbor

gene id symbol gene type direction distance location
AMCG00006370 NA coding upstream 38730 3292743 ~ 3301359 (+)
AMCG00006367 NA coding upstream 107112 3220219 ~ 3232977 (+)
AMCG00006364 NA coding upstream 162550 3151072 ~ 3177539 (+)
AMCG00006360 NA coding upstream 228514 3094082 ~ 3111575 (+)
AMCG00006359 NA coding upstream 338799 2989143 ~ 3001290 (+)
AMCG00006375 NA coding downstream 25384 3419315 ~ 3421518 (+)
AMCG00006374 NA coding downstream 32494 3426425 ~ 3428561 (+)
AMCG00006378 NA coding downstream 147787 3541718 ~ 3552354 (+)
AMCG00006383 NA coding downstream 191524 3585455 ~ 3596853 (+)
AMCG00006384 NA coding downstream 230016 3623947 ~ 3632121 (+)
G109260 NA non-coding upstream 103688 3234905 ~ 3236401 (+)
G109218 NA non-coding upstream 270861 3016779 ~ 3069228 (+)
G109217 NA non-coding upstream 311443 3004856 ~ 3028646 (+)
G109011 LOC100846954 non-coding upstream 821555 2436058 ~ 2518534 (+)
G109010 NA non-coding upstream 936938 2402903 ~ 2403151 (+)
G109389 NA non-coding downstream 154683 3548614 ~ 3548988 (+)
G109405 NA non-coding downstream 305177 3699108 ~ 3714779 (+)
G109392 NA non-coding downstream 328588 3722519 ~ 3755041 (+)
G109412 NA non-coding downstream 335956 3729887 ~ 3730840 (+)
G109396 NA non-coding downstream 378618 3772549 ~ 3774544 (+)
AMCG00006368 NA other upstream 53910 3274782 ~ 3286179 (+)
AMCG00006366 NA other upstream 88009 3242937 ~ 3252080 (+)
G108626 rps5,LOC107086176 other upstream 1525479 1637397 ~ 1814610 (+)
AMCG00006294 NA other upstream 1598753 1735932 ~ 1741336 (+)
G108585 NA other upstream 1910102 1350383 ~ 1429987 (+)
G109362 NA other downstream 109250 3503181 ~ 3506679 (+)
AMCG00006379 NA other downstream 176108 3570039 ~ 3621796 (+)
AMCG00006385 NA other downstream 205310 3599241 ~ 3612758 (+)
AMCG00006387 NA other downstream 243812 3637743 ~ 3648911 (+)
AMCG00006393 ppp1r11,LOC107711309 other downstream 465003 3858934 ~ 3864732 (+)

Expression


Co-expression Network